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'engagement_state' all being 'engaged' #815

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jkim0731 opened this issue May 31, 2022 · 0 comments
Open

'engagement_state' all being 'engaged' #815

jkim0731 opened this issue May 31, 2022 · 0 comments

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@jkim0731
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All engagement_state values are 'engaged' regardless of values on engaged column in extended_stimulus_presentations and extended_trials tables.

Checked by

dataset = cache.get_behavior_ophys_experiment(ophys_experiment_id)
extended_stimulus = loading.get_extended_stimulus_presentations_table(dataset.stimulus_presentations, dataset.licks, dataset.rewards, dataset.running_speed)
extended_stimulus['reward_rate','engaged','engagement_state'].head(50)

A simple fix might work from
def get_extended_stimulus_presentations_table in loading.py

where

stimulus_presentations['engagement_state'] = ['engaged' if True else 'disengaged' for engaged in stimulus_presentations['engaged'].values]

should have been

stimulus_presentations['engagement_state'] = ['engaged' if engaged==True else 'disengaged' for engaged in stimulus_presentations['engaged'].values]

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