Fixed issue in UniprotFinder related to TrEMBL and Swiss-Prot IDs being parsed due to qacc and sacc specifiers being used to format outfmt 6.

rfm-targa · rfm-targa · commit 69acb5e699b0 · 2024-08-06T14:29:14.000+01:00
diff --git a/CHEWBBACA/utils/constants.py b/CHEWBBACA/utils/constants.py
@@ -246,7 +246,7 @@
 BLAST_TASK_THRESHOLD = {'blastn': 50, 'blastp': 30}
 
 # BLAST outfmt
-BLAST_DEFAULT_OUTFMT = '6 qaccver qstart qend qlen saccver slen score'
+BLAST_DEFAULT_OUTFMT = '6 qseqid qstart qend qlen sseqid slen score'
 
 # Input file prefix maximum length
 PREFIX_MAXLEN = 30
