This repository hosts the workshop' jupyter notebooks and markdown files for the BioImage Analysis and Data Processing Workshop 2025, which takes place in VMCF Microscopy Facility, Vinicna 7, Prague, Czechia
This work is licensed by the Bio-Image Analysis Technology Development group (BiAPoL), Cluster of Excellence Physics of Life (PoL), Dresden, under a Creative Commons Attribution 4.0 International License. It contains derived materials from previous work from Robert Haase (ScaDS AI Leipzig), Johannes Soltwedel (PoL Dresden), Maleeha Hassan (PoL Dresden).
The Jupyter book of the course can be viewed under this URL: https://github.com/BiAPoL/BioImage-Analysis-and-Data-Processing-Workshop-2025
It is maintained using Jupyter lab and build using Jupyter book.
This repository is partly derived from Trends in Microscopy and QM Course Lectures on Bio-Image Analysis with napari 2025.
I would like to thank all people who made previous contributions to this work and to Zuzana Burdíková and Martin Schätz (Charles University Prague) for the invitation to give these lectures.