Fetching sample datasets remotely #1456
Workflow file for this run
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| # This workflows will upload a Python Package using Twine when a release is created | |
| # For more information see: https://help.github.com/en/actions/language-and-framework-guides/using-python-with-github-actions#publishing-to-package-registries | |
| name: tests | |
| on: | |
| push: | |
| branches: | |
| - master | |
| - main | |
| tags: | |
| - "*" # Push events with any tag | |
| pull_request: | |
| branches: | |
| - master | |
| - main | |
| workflow_dispatch: | |
| jobs: | |
| add-assets-to-release: | |
| name: Add Sample Data Asset to Release | |
| if: startsWith(github.ref, 'refs/tags/') # only run on tag pushes (releases) | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Create sample_data.zip | |
| run: | | |
| cd src/napari_clusters_plotter/sample_data | |
| zip -r ../../../sample_data.zip . -x "*.git*" | |
| - name: Upload Sample Data Asset | |
| uses: softprops/action-gh-release@v1 | |
| with: | |
| files: sample_data.zip | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| test: | |
| name: ${{ matrix.platform }} py${{ matrix.python-version }} | |
| runs-on: ${{ matrix.platform }} | |
| needs: [add-assets-to-release] # Wait for assets to be uploaded | |
| if: always() # Run tests even if no release assets (for PRs) | |
| strategy: | |
| matrix: | |
| platform: [ubuntu-latest, windows-latest, macos-latest] # macos-latest (disabled, see related issue) | |
| python-version: ["3.10", "3.11", "3.12", "3.13"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| # these libraries enable testing on Qt on linux | |
| - uses: tlambert03/setup-qt-libs@v1 | |
| # strategy borrowed from vispy for installing opengl libs on windows | |
| - name: Install Windows OpenGL | |
| if: runner.os == 'Windows' | |
| run: | | |
| git clone --depth 1 https://github.com/pyvista/gl-ci-helpers.git | |
| powershell gl-ci-helpers/appveyor/install_opengl.ps1 | |
| # note: if you need dependencies from conda, considering using | |
| # setup-miniconda: https://github.com/conda-incubator/setup-miniconda | |
| # and | |
| # tox-conda: https://github.com/tox-dev/tox-conda | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install setuptools tox tox-gh-actions | |
| # this runs the platform-specific tests declared in tox.ini | |
| - name: Test with tox | |
| uses: aganders3/headless-gui@v2 | |
| with: | |
| run: python -m tox | |
| env: | |
| PLATFORM: ${{ matrix.platform }} | |
| - name: Coverage | |
| uses: codecov/codecov-action@v3 | |
| build: | |
| name: Build distribution 📦 | |
| needs: [test] # Wait for tests to pass | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.x" | |
| - name: Install pypa/build | |
| run: >- | |
| python3 -m pip install build --user | |
| - name: Build a binary wheel and a source tarball | |
| run: python3 -m build | |
| - name: Store the distribution packages | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: python-package-distributions | |
| path: dist/ | |
| publish-to-pypi: | |
| name: >- | |
| Publish Python 🐍 distribution 📦 to PyPI | |
| if: startsWith(github.ref, 'refs/tags/') # only publish to PyPI on tag pushes | |
| needs: | |
| - test | |
| - build | |
| runs-on: ubuntu-latest | |
| environment: | |
| name: pypi | |
| url: https://pypi.org/project/napari-clusters-plotter/ | |
| permissions: | |
| id-token: write # IMPORTANT: mandatory for trusted publishing | |
| steps: | |
| - name: Download all the dists | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: python-package-distributions | |
| path: dist/ | |
| - name: Publish distribution 📦 to PyPI | |
| uses: pypa/gh-action-pypi-publish@release/v1 |