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Use set() to remove duplicates #183

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Use set() to remove duplicates #183

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6 changes: 1 addition & 5 deletions LDlink/LDmatrix.py
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Original file line number Diff line number Diff line change
Expand Up @@ -64,11 +64,7 @@ def calculate_matrix(snplst, pop, request, web, request_method, genome_build, r2
return("", "")

# Remove duplicate RS numbers
snps = []
for snp_raw in snps_raw:
snp = snp_raw.strip().split()
if snp not in snps:
snps.append(snp)
snps = set(snp_raw.strip().split() for snp_raw in snps_raw)

# Select desired ancestral populations
pops = pop.split("+")
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