Feat/clin 4825 for production #604
Merged
Conversation
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Stable/production
Stable/staging
* Introduced a TEST environment in config.py * Added TODO comments in franklin.py for code sections that need refactoring * Updated requirements.txt * Created a pytest.ini file for Pytest configuration * Fixed the franklin_password value in variables.json * Added a global DAG bag test * Added unit tests for etl_import_franklin * Added unit tests for Franklin utilities * Documented how to run tests in README.md
This version is using new partitioning by analysis_id and bioinfo_analysis_code for tables normalized_snv_somatic and enriched_snv_somatic
…-clin-variant-etl-to-3.13.0 feat: CLIN-4690 update clin-variant-etl version to 3.13.0
Stable/production
Stable/staging
…lin-variant-etl-version-to-3.13.1 fix: CLIN-3135 bump clin variant etl version to 3.13.1
…lin-variant-etl-version-to-3.14.0 feat: CLIN-4759 bumping clin-variant-etl version to 3.14.0
Stable/production
Stable/staging
…sequencing-ids feat: CLIN-4328 - batch ids and sequencing ids Part 1
…g-release Feat/clin 4328 staging release
Stable/staging
feat: CLIN-4328 - steps as template
…aging feat: CLIN-4825 pipeline image and spark jar versions
CLIN-4825 release
creativeyann17
approved these changes
Jul 16, 2025
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
No description provided.