Frietze Lab @ UVM
Bioinformatics software, scripts, and analysis projects developed by the Frietze Lab
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Showing 10 of 18 repositories
- chiptsne2 Public
General ChIPseq and epigenetic-seq workflow R package with support for t-SNE and UMAP to discover combinatorial epigenetic patterns.
FrietzeLabUVM/chiptsne2’s past year of commit activity - TAP Public
Pipeline to process RNAseq and ChIPseq data. Outputs include gene counts, transcripts per million, alternate splicing events, SNP calls, and bigwigs. Supports both Docker and Singularity for all dependencies.
FrietzeLabUVM/TAP’s past year of commit activity - BRD_PPIN Public
FrietzeLabUVM/BRD_PPIN’s past year of commit activity - ATACseq Public Forked from tobiasrausch/ATACseq
Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)
FrietzeLabUVM/ATACseq’s past year of commit activity
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