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@Functional-Genomics

EBI Functional Genomics Group

Functional Genomics Group from EBI - lead by A. Brazma

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  1. scrnaseq_python_2023 scrnaseq_python_2023 Public

    Materials for the EBI course "Single-cell RNA-seq analysis using Python 2023"

    Jupyter Notebook 8 2

  2. eQTL eQTL Public

    eQTL analysis pipeline

    Python 4 1

  3. pancancer pancancer Public

    Pancancer related code and aux. data.

    R 4 2

  4. atlas_gsa atlas_gsa Public

    Gene set analysis based on fisher exact test

    R 2 2

  5. scRNA-seq_python_course_2024 scRNA-seq_python_course_2024 Public

    Course materials for EBI course scRNA-seq analysis in Python, 2024

    Jupyter Notebook 2 7

  6. TeachingMaterial TeachingMaterial Public

    Forked from barzine/TeachingMaterial

    RNA-seq data analysis practical

    1 3

Repositories

Showing 9 of 9 repositories
  • scRNA-seq_python_course_2024 Public

    Course materials for EBI course scRNA-seq analysis in Python, 2024

    Jupyter Notebook 2 7 1 0 Updated Feb 20, 2025
  • scrnaseq_python_2023 Public

    Materials for the EBI course "Single-cell RNA-seq analysis using Python 2023"

    Jupyter Notebook 8 2 0 0 Updated Nov 17, 2023
  • CATD Public

    CATD: Critical Assessment of Transcriptomics Deconvolution

    R 1 MIT 0 0 0 Updated Sep 16, 2021
  • cross-species-cellgroup-comparison Public Forked from ebi-gene-expression-group/cross-species-cellgroup-comparison

    Development project for comparing cell groupings between experiments across species

    Python 1 2 0 0 Updated Mar 26, 2021
  • eQTL Public

    eQTL analysis pipeline

    Python 4 1 6 0 Updated Jul 3, 2019
  • single_lib_qc Public
    HTML 0 GPL-3.0 0 0 0 Updated Mar 1, 2018
  • atlas_gsa Public

    Gene set analysis based on fisher exact test

    R 2 LGPL-3.0 2 0 0 Updated Oct 26, 2017
  • pancancer Public

    Pancancer related code and aux. data.

    R 4 LGPL-3.0 2 0 0 Updated May 3, 2017
  • TeachingMaterial Public Forked from barzine/TeachingMaterial

    RNA-seq data analysis practical

    1 44 0 0 Updated Nov 26, 2015