MULTI-ATAC

Companion code and R objects to reproduce key figures in:

"Reducing batch effects in single cell chromatin accessibility measurements by pooled transposition with MULTI-ATAC"

Conrad DN, et al. bioRxiv (2025)

Name		Name	Last commit message	Last commit date
Latest commit History 6 Commits
CustomFunctions.R		CustomFunctions.R
DrugScreen_Analysis.R		DrugScreen_Analysis.R
DrugScreen_GSEA_GeneScores.rds		DrugScreen_GSEA_GeneScores.rds
DrugScreen_GSEA_RNA.rds		DrugScreen_GSEA_RNA.rds
DrugScreen_SigMarkers.rds		DrugScreen_SigMarkers.rds
LICENSE		LICENSE
MultidonorPBMCPilot_Analysis.R		MultidonorPBMCPilot_Analysis.R
MultiomePilot_Analysis.R		MultiomePilot_Analysis.R
PackageVersions.tsv		PackageVersions.tsv
PooledParallel_Analysis.R		PooledParallel_Analysis.R
PublishedDatasets_Analysis.R		PublishedDatasets_Analysis.R
PublishedDatasets_CellTypeFoldChange.rds		PublishedDatasets_CellTypeFoldChange.rds
PublishedDatasets_Master.rds		PublishedDatasets_Master.rds
PublishedDatasets_Tn5Summary.rds		PublishedDatasets_Tn5Summary.rds
README.md		README.md

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