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Continuous integration for JOANNE #57

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67 changes: 67 additions & 0 deletions .github/workflows/ci.yml
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# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

name: Python package

on:
push:
branches: [ "master" ]
pull_request:
branches: [ "master" ]

jobs:
build:

runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: ["3.8", "3.9", "3.10"]

steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v3
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install flake8 pytest
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
- name: Lint with flake8
run: |
# stop the build if there are Python syntax errors or undefined names
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Test with pytest
run: |
pytest

- name: Build docs
run: |
cd docs && make html
- name: Archive build artifacts (i.e. documentation)
uses: actions/upload-artifact@v2
with:
name: docs
path: |
docs/build

publish:
needs: build
# Only publish documentation when merging into `origin/main`.`
if: "github.event_name == 'pull_request' && github.ref == 'refs/heads/ci' && github.repository_owner == 'Geet-George'"
runs-on: ubuntu-latest
steps:
- name: Download compiled book
uses: actions/download-artifact@v2
with:
name: docs
path: build
- name: Publish book on github pages
uses: peaceiris/actions-gh-pages@v3
with:
github_token: ${{ secrets.GITHUB_TOKEN }}
publish_dir: build/html
20 changes: 20 additions & 0 deletions docs/Makefile
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# Minimal makefile for Sphinx documentation
#

# You can set these variables from the command line, and also
# from the environment for the first two.
SPHINXOPTS ?=
SPHINXBUILD ?= sphinx-build
SOURCEDIR = source
BUILDDIR = build

# Put it first so that "make" without argument is like "make help".
help:
@$(SPHINXBUILD) -M help "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)

.PHONY: help Makefile

# Catch-all target: route all unknown targets to Sphinx using the new
# "make mode" option. $(O) is meant as a shortcut for $(SPHINXOPTS).
%: Makefile
@$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)
35 changes: 35 additions & 0 deletions docs/make.bat
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@ECHO OFF

pushd %~dp0

REM Command file for Sphinx documentation

if "%SPHINXBUILD%" == "" (
set SPHINXBUILD=sphinx-build
)
set SOURCEDIR=source
set BUILDDIR=build

%SPHINXBUILD% >NUL 2>NUL
if errorlevel 9009 (
echo.
echo.The 'sphinx-build' command was not found. Make sure you have Sphinx
echo.installed, then set the SPHINXBUILD environment variable to point
echo.to the full path of the 'sphinx-build' executable. Alternatively you
echo.may add the Sphinx directory to PATH.
echo.
echo.If you don't have Sphinx installed, grab it from
echo.https://www.sphinx-doc.org/
exit /b 1
)

if "%1" == "" goto help

%SPHINXBUILD% -M %1 %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% %O%
goto end

:help
%SPHINXBUILD% -M help %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% %O%

:end
popd
58 changes: 58 additions & 0 deletions docs/source/conf.py
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# Configuration file for the Sphinx documentation builder.
#
# This file only contains a selection of the most common options. For a full
# list see the documentation:
# https://www.sphinx-doc.org/en/master/usage/configuration.html

# -- Path setup --------------------------------------------------------------

# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
#
# import os
# import sys
# sys.path.insert(0, os.path.abspath('.'))

# -- Project information -----------------------------------------------------

project = "JOANNE"
copyright = "2022, Geet George"
author = "Geet George"

# The full version, including alpha/beta/rc tags
release = "v2.1.0" # joanne.__version__


# -- General configuration ---------------------------------------------------

# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
"sphinx.ext.duration",
"sphinx.ext.doctest",
"sphinx.ext.autodoc",
]

# Add any paths that contain templates here, relative to this directory.
templates_path = ["_templates"]

# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
# This pattern also affects html_static_path and html_extra_path.
exclude_patterns = []


# -- Options for HTML output -------------------------------------------------

# The theme to use for HTML and HTML Help pages. See the documentation for
# a list of builtin themes.
#
html_theme = "furo"

# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ["_static"]

24 changes: 24 additions & 0 deletions docs/source/index.rst
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.. JOANNE documentation master file, created by
sphinx-quickstart on Thu Jul 21 16:35:31 2022.
You can adapt this file completely to your liking, but it should at least
contain the root `toctree` directive.

Welcome to JOANNE's documentation!
==================================

.. toctree::
:maxdepth: 2
:caption: Contents:



Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`

.. autofunction:: joanne.Level_2.fn_2.pres_bounds
.. autofunction:: joanne.Level_2.fn_2.temp_bounds
.. autofunction:: joanne.Level_2.fn_2.gps_bounds
2 changes: 2 additions & 0 deletions requirements.txt
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sphinx
furo
3 changes: 3 additions & 0 deletions tests/test_functions.py
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def test_func():
assert 1 == 1