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Grossfield Lab edited this page Jun 5, 2019 · 11 revisions

LOOS Wiki

Main documentation
Tutorials and HowTos

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Toggle table of contents Pages 23

Home
- LOOS Wiki
Analyzing carbohydrate simulations
Analyzing membrane simulations
Analyzing nucleic acid simulations
Analyzing simulations run with OpenMM
Analyzing simulations with LOOS
Basic Terms and Key Classes
Developing with common editors
How do I start writing a new tool?
Interoperating with Numpy
Preparing to analyze a gromacs simulation
Preparing to analyze a NAMD simulation
Tutorials for Developers
Tutorials for Users
Use fullhelper.py to simplify writing and updating fullhelp messages
Using config files instead of the command line
Using LOOS for Principal Component Analysis
Using LOOS with Tinker
Using the range option
Why did I get an error message saying "Error unrecognised option" when I give a negative number on the command line?
Why you should write tools with PyLOOS
Working with trajectories in python
Writing a new tool without python

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