Update feature/sparse_data with develop #5624
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* Fix an oversize allocation in t_bigio on 32-bit systems A test in t_bigio.c attempts to allocate more than 4 GiB of memory, which will overflow (and wrap) the size_t type on 32-bit systems, creating a very small allocation instead of a very large allocation. The test then segfaults when it accesses memory outside of the small buffer. The test has been fixed by limiting the buffer to 2 GiB on 32-bit systems.
* Ignore warnings so only errors fail
…rs (#5356) Some standard headers might implicitly include `float.h`. If that happens before `__STDC_WANT_IEC_60559_TYPES_EXT__` is defined, the macros that are needed for the `_Float16` data type (like `FLT16_MAX`) might not be defined. That is happening with mingw-w64 headers since the following change: mingw-w64/mingw-w64@b40b6a0 Define `__STDC_WANT_IEC_60559_TYPES_EXT__` before including other headers in `H5private.h` to make that scenario less likely.
* h5cc: Fix location of settings and pkgconfig files In h5cc and other compiler wrappers, drop hardcoded 'lib' as the dir for libhdf5.settings and pkgconfig scripts and use cmake computed values for HDF5_INSTALL_LIB_DIR. This fixes issues on systems where the libdir is 'lib64' for instance, as on 64-bit Linux OSes, and 'lib' in the wrappers point to incorrect locations of the settings and pkgconfig files. * h5cc: Drop -show from output when calling command. When calling `h5cc -show FOO`, the output should not repeat the '-show' argument itself. This commit fixes the '-show' command invoked from a cmake built h5cc to be consistent with an (previously) autotools built one.
…5404) Build test generator programs against shared libraries, if available, by default. Otherwise, build them against static libraries. If HDF5_BUILD_STATIC_TOOLS is set to ON, the tools test generator programs will be built against static libraries even if shared libraries are available.
Updates `actions/download-artifact` from 4.1.9 to 4.2.1 Updates `github/codeql-action` from 3.28.10 to 3.28.13
…#5387) * Revert to old form of warning flag
…s_fopen() (#5415) * Remove H5Epop calls after switching to error stack pausing mechanism
clang complains that H5FD_MEM_NTYPES, which is a member of H5FD_mem_t, is being used with a variable of type H5F_mem_page_t. This is fine since H5F_mem_t is a subset of H5F(D)_mem_page_t and we're restricting ourselves to the subset in this case.
* Add Linux only Developer workflow * Add Windows job * -Og already set in GNUFlags file for Debug/Developer mode * Skip fheap test that times out * Add mac and clang jobs * Control version of CMake when building with plugins
* Maintain tool testfile division in build folders * Add h5dump reference files to shared folder * Fix testfile path for java * Remove unused filter
* Disable directvfd for windows * Windows must have config mode
Adds workflow to build ROS3 VFD and optionally build aws-c-s3 library from source or use package managers Adds testing of ROS3 VFD with s3proxy and docker Adds new H5Pset_fapl_ros3_endpoint()/H5Pget_fapl_ros3_endpoint() API functions to set/get an alternative endpoint URL to use when opening files with the ROS3 VFD Cleans up warnings in tools and tests related to ROS3 VFD structure size Co-authored-by: Larry Knox <[email protected]> Co-authored-by: Allen Byrne <[email protected]>
* Remove unnecessary workflow installs * Reduce the number of linkchecker threads
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