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@HKU-BAL

HKU CDS BioAI Laboratory

Research group led by Ruibang Luo in Computer Science, HKU. Previously known as "HKUCS Bioinformatics Algorithms Lab".

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  1. Clair3 Clair3 Public

    Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

    Python 315 35

  2. ClairS ClairS Public

    ClairS - a deep-learning method for long-read somatic small variant calling

    Python 99 9

  3. ClairS-TO ClairS-TO Public

    ClairS-TO - a deep-learning method for tumor-only somatic variant calling

    Python 74 4

  4. Gungnir Gungnir Public

    Guess till correct: Gungnir codec enabling high error-tolerance and low-redundancy DNA storage through substantial computing power

    Go 11

Repositories

Showing 10 of 34 repositories
  • ClairS Public

    ClairS - a deep-learning method for long-read somatic small variant calling

    HKU-BAL/ClairS’s past year of commit activity
    Python 99 BSD-3-Clause 9 6 0 Updated Nov 18, 2025
  • ClairS-TO Public

    ClairS-TO - a deep-learning method for tumor-only somatic variant calling

    HKU-BAL/ClairS-TO’s past year of commit activity
    Python 74 BSD-3-Clause 4 5 0 Updated Nov 13, 2025
  • Clair-Mosaic Public

    Clair-Mosaic - a deep-learning method for long-read mosaic small variant calling

    HKU-BAL/Clair-Mosaic’s past year of commit activity
    Python 5 BSD-3-Clause 0 0 0 Updated Nov 13, 2025
  • Gungnir Public

    Guess till correct: Gungnir codec enabling high error-tolerance and low-redundancy DNA storage through substantial computing power

    HKU-BAL/Gungnir’s past year of commit activity
    Go 11 BSD-3-Clause 0 0 0 Updated Nov 5, 2025
  • Clair3 Public

    Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

    HKU-BAL/Clair3’s past year of commit activity
    Python 315 35 10 0 Updated Sep 25, 2025
  • ClusterV-Web Public
    HKU-BAL/ClusterV-Web’s past year of commit activity
    C 3 BSD-3-Clause 0 0 0 Updated Aug 22, 2025
  • Clair3-Nova Public

    de novo variant calling in trio using Nanopore long-reads

    HKU-BAL/Clair3-Nova’s past year of commit activity
    Python 14 BSD-3-Clause 0 1 0 Updated Aug 11, 2025
  • Governome Public

    Governome - Towards a new standard in genomic data privacy: a realization of owner-governance

    HKU-BAL/Governome’s past year of commit activity
    Go 5 BSD-3-Clause 0 0 0 Updated Aug 8, 2025
  • AutoPM3 Public
    HKU-BAL/AutoPM3’s past year of commit activity
    Python 16 MIT 3 0 0 Updated Jul 28, 2025
  • Clair3-RNA Public

    Clair3-RNA - a long-read small variant caller for RNA sequencing data

    HKU-BAL/Clair3-RNA’s past year of commit activity
    Python 33 BSD-3-Clause 2 6 0 Updated Apr 8, 2025
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