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@Huang-lab

Huang Lab

Precision Omics Lab at Icahn School of Mount Sinai (PI: Kuan-lin Huang)

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  1. AIScientist AIScientist Public

    AI-Scientist is a playground to build accessible agents for automated research to drive meaningful scientific progress that can benefit the society

    Python 5 1

  2. AeQTL AeQTL Public

    Python 4 3

  3. GetFreeCopy GetFreeCopy Public

    Get Free Copy: A Multi-Repository Search Platform for Biomedical Publications

    SCSS 3 2

  4. figure-extractor figure-extractor Public

    Flask-based service using PDFFigures 2.0 to extract figures and tables from scholarly PDFs. Features REST API, CLI, Docker support, and JSON metadata output (~1.5s/page processing). Designed for do…

    Python 3

  5. oppti oppti Public

    Outlier Protein and Phosphosite Target Identifier

    R 2 1

  6. SParCS SParCS Public

    HTML 2 3

Repositories

Showing 10 of 29 repositories
  • scOmics_equity Public
    Huang-lab/scOmics_equity’s past year of commit activity
    R 0 0 0 0 Updated Jul 16, 2025
  • AiGCT Public
    Huang-lab/AiGCT’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Jul 15, 2025
  • GetFreeCopy Public

    Get Free Copy: A Multi-Repository Search Platform for Biomedical Publications

    Huang-lab/GetFreeCopy’s past year of commit activity
    SCSS 3 2 0 0 Updated Jul 2, 2025
  • BEACON Public
    Huang-lab/BEACON’s past year of commit activity
    R 0 MIT 0 0 0 Updated Jul 2, 2025
  • MaPR Public
    Huang-lab/MaPR’s past year of commit activity
    R 1 MIT 0 0 0 Updated Jun 26, 2025
  • figure-extractor Public

    Flask-based service using PDFFigures 2.0 to extract figures and tables from scholarly PDFs. Features REST API, CLI, Docker support, and JSON metadata output (~1.5s/page processing). Designed for document processing and RAG pipelines.

    Huang-lab/figure-extractor’s past year of commit activity
    Python 3 0 0 0 Updated Jan 5, 2025
  • pQTL Public
    Huang-lab/pQTL’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Oct 21, 2024
  • paperRAG Public

    paperRAG is a command-line interface (CLI) tool for populating and querying a database with PDF documents

    Huang-lab/paperRAG’s past year of commit activity
    Jupyter Notebook 2 0 0 0 Updated Sep 24, 2024
  • TissueSpecificCancerRisk Public
    Huang-lab/TissueSpecificCancerRisk’s past year of commit activity
    R 0 0 0 0 Updated Sep 4, 2024
  • MAVEN Public
    Huang-lab/MAVEN’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Sep 1, 2024
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