ENH: Add ITK_Example_TomlFileFormatForParameterFiles.ipynb

[N-Dekker]

Demonstrates TOML support for elastix registration parameter files and transformation parameter files.

---

@thewtex @mstaring @stefanklein Please have a look!

[review-notebook-app]

Check out this pull request on 

See visual diffs & provide feedback on Jupyter Notebooks.

---

Powered by ReviewNB

[thewtex]

Line #8.        import pip._vendor.tomli as tomllib  # the same tomllib that's now included in Python v3.11+

Cool!

Reply via ReviewNB

[N-Dekker]

@thewtex Actually I also liked your suggestion to pip install tomllib for older versions of Python, but I couldn't remember how to do that exactly. 🤷

[thewtex]

@N-Dekker well done ! 🎇

[N-Dekker]

FYI, this force-push sets the center of rotation of the initial transformation at (0.0, 0.0). I think that's nice, because now the initial transformation does not need to know about the image sizes. Instead, the images are now adjusted to have their centers at world coordinates (0.0, 0.0) as well.

[N-Dekker]

@thewtex Is it OK to you if we just merge this Jupyter Notebook PR now? The wasm build still fails, but that seems unrelated.

The wasm build has a few harmless warnings (warning: unused parameter 'filename' [-Wunused-parameter]). Do those warnings make the CI fail? Or is it the error message at the end? As follows:

Pixi task (bindgen-typescript): npx itk-wasm -b emscripten-build bindgen --interface typescript --output-dir $ITK_WASM_TYPESCRIPT_OUTPUT_DIR --package-name $ITK_WASM_TYPESCRIPT_PACKAGE_NAME --package-description "$ITK_WASM_DESCRIPTION" --repository "$ITK_WASM_REPOSITORY": (Generate typescript bindings)
Error:   × failed to parse glob expression

Anyway, it's clearly beyond the scope of this PR 😇

[thewtex]

@N-Dekker yes, merge sounds good to me. I thought I fixed wasm CI in another PR. I will take another pass when we upgrade to v5.4.3.