remove implicit cycling

GraphRecipes/src/GraphRecipes.jl

@@ -3,6 +3,7 @@ module GraphRecipes
 using Graphs
 using PlotUtils         # ColorGradient
 using RecipesBase
+using PlotsBase: PlotsBase, partialcircle
 
 using InteractiveUtils  # subtypes
 using LinearAlgebra

GraphRecipes/src/graphs.jl

@@ -1132,7 +1132,7 @@ more details.
                 colorbar_entry --> false
                 markersize := 0
                 markeralpha := 0
-                markerstrokesize := 0
+                makerstrokewidth := 0
                 isnothing(edgelabel) || (annotations --> edge_label_array)
             else
                 seriestype := :scatter
@@ -1153,7 +1153,7 @@ more details.
                 colorbar_entry --> false
                 markersize := 0
                 markeralpha := 0
-                markerstrokesize := 0
+                makerstrokewidth := 0
                 annotations --> edge_label_array
             end
         end

GraphRecipes/src/utils.jl

@@ -261,15 +261,8 @@ function process_edge_attribute(attr, source, destiny, weights)
     end
     return attr
 end
-# Function from Plots/src/components.jl
-"get an array of tuples of points on a circle with radius `r`"
-function partialcircle(start_θ, end_θ, n = 20, r = 1)
-    return Tuple{Float64, Float64}[
-        (r * cos(u), r * sin(u)) for u in range(start_θ, stop = end_θ, length = n)
-    ]
-end
 
-function partialcircle(start_θ, end_θ, circle_center::Array{T, 1}, n = 20, r = 1) where {T}
+function PlotsBase.Shapes.partialcircle(start_θ, end_θ, circle_center::Array{T, 1}, n = 20, r = 1) where {T}
     return Tuple{Float64, Float64}[
         (r * cos(u) + circle_center[1], r * sin(u) + circle_center[2]) for
             u in range(start_θ, stop = end_θ, length = n)

GraphRecipes/test/functions.jl

@@ -1,3 +1,7 @@
+using AbstractTrees
+using StableRNGs
+using GraphRecipes.Graphs
+
 function random_labelled_graph()
     n = 15
     rng = StableRNG(1)

GraphRecipes/test/parse_readme.jl

@@ -17,4 +17,4 @@ end
 # the installation instructions.
 readme_exprs = [Meta.parse("begin $(code_blocks[i]) end") for i in 2:length(code_blocks)]
 
-julia_logo_pun() = eval(readme_exprs[1])
+readme_julia_logo_pun() = eval(readme_exprs[1])

GraphRecipes/test/runtests.jl

@@ -1,19 +1,17 @@
 using VisualRegressionTests
 using AbstractTrees
 using LinearAlgebra
-using GraphRecipes
+using Logging
 using GraphRecipes
 using SparseArrays
 using ImageMagick
 using StableRNGs
-using Logging
 using Graphs
 using Plots
+using Plots.PlotsBase
 using Test
 using Gtk  # for popup
 
-const PlotsBase = Plots.PlotsBase
-
 isci() = get(ENV, "CI", "false") == "true"
 itol(tol = nothing) = something(tol, isci() ? 1.0e-3 : 1.0e-5)
 
@@ -22,45 +20,29 @@ include("parse_readme.jl")
 
 default(show = false, reuse = true)
 
-@testset "functions" begin
-    rng = StableRNG(1)
-    for method in keys(GraphRecipes._graph_funcs)
-        method ≡ :spectral && continue  # FIXME
-        dat = if (inp = GraphRecipes._graph_inputs[method]) ≡ :adjmat
-            [
-                0 1 1
-                1 0 1
-                1 1 0
-            ]
-        elseif inp ≡ :sourcedestiny
-            Symmetric(sparse(rand(rng, 0:1, 8, 8)))
-        elseif inp ≡ :adjlist
-            dat = [
-                0 1 1 0 0 0 0 0 0 0
-                0 0 0 0 1 1 0 0 0 0
-                0 0 0 1 0 0 1 0 1 0
-                0 0 0 0 0 0 0 0 0 0
-                0 0 0 0 0 0 0 1 0 1
-                0 0 0 0 0 0 0 0 0 0
-                0 0 0 0 0 0 0 0 0 0
-                0 0 0 0 0 0 0 0 0 0
-                0 0 0 0 0 0 0 0 0 0
-                0 0 0 0 0 0 0 0 0 0
-            ]
-        else
-            @error "wrong input $inp"
+cd(joinpath(@__DIR__, "..", "assets")) do
+    @testset "TestImages" begin
+        figure_files = readdir()
+        @testset "$figure_file" for figure_file in figure_files
+            figure = splitext(figure_file)[1]
+            if figure == "julia_type_tree"
+                if VERSION >= v"1.11" # julia 1.11 introduced Core.BFloat16
+                    @plottest julia_type_tree() "julia_type_tree.png" popup = !isci() tol = itol()
+                end
+            else
+                @plottest getproperty(@__MODULE__, Symbol(figure))() figure_file popup = !isci() tol =
+                    itol()
+            end
         end
-        pl = graphplot(dat; method)
-        @test pl isa PlotsBase.Plot
     end
 end
 
 @testset "issues" begin
     @testset "143" begin
         g = SimpleGraph(7)
+
         add_edge!(g, 2, 3)
         add_edge!(g, 3, 4)
-
         @test g.ne == 2
         al = GraphRecipes.get_adjacency_list(g)
         @test isempty(al[1])
@@ -96,22 +78,22 @@ end
     @testset "180" begin
         rng = StableRNG(1)
         mat = Symmetric(sparse(rand(rng, 0:1, 8, 8)))
-        graphplot(mat; method = :arcdiagram, rng)
+        graphplot(mat, method = :arcdiagram, rng = rng)
     end
 end
 
 @testset "utils.jl" begin
     rng = StableRNG(1)
-    @test GraphRecipes.directed_curve(0.0, 1.0, 0.0, 1.0; rng) ==
-        GraphRecipes.directed_curve(0, 1, 0, 1; rng)
+    @test GraphRecipes.directed_curve(0.0, 1.0, 0.0, 1.0, rng = rng) ==
+        GraphRecipes.directed_curve(0, 1, 0, 1, rng = rng)
 
-    @test GraphRecipes.isnothing(nothing) == PlotsBase.isnothing(nothing)
-    @test GraphRecipes.isnothing(missing) == PlotsBase.isnothing(missing)
-    @test GraphRecipes.isnothing(NaN) == PlotsBase.isnothing(NaN)
-    @test GraphRecipes.isnothing(0) == PlotsBase.isnothing(0)
-    @test GraphRecipes.isnothing(1) == PlotsBase.isnothing(1)
-    @test GraphRecipes.isnothing(0.0) == PlotsBase.isnothing(0.0)
-    @test GraphRecipes.isnothing(1.0) == PlotsBase.isnothing(1.0)
+    @test GraphRecipes.isnothing(nothing) == Plots.isnothing(nothing)
+    @test GraphRecipes.isnothing(missing) == Plots.isnothing(missing)
+    @test GraphRecipes.isnothing(NaN) == Plots.isnothing(NaN)
+    @test GraphRecipes.isnothing(0) == Plots.isnothing(0)
+    @test GraphRecipes.isnothing(1) == Plots.isnothing(1)
+    @test GraphRecipes.isnothing(0.0) == Plots.isnothing(0.0)
+    @test GraphRecipes.isnothing(1.0) == Plots.isnothing(1.0)
 
     for (s, e) in [(rand(rng), rand(rng)) for i in 1:100]
         @test GraphRecipes.partialcircle(s, e) == PlotsBase.partialcircle(s, e)
@@ -144,52 +126,37 @@ end
     # checking that they don't error. Also, test all of the different aliases.
     @testset "Aliases" begin
         A = [1 0 1 0; 0 0 1 1; 1 1 1 1; 0 0 1 1]
-        graphplot(A; markercolor = :red, markershape = :rect, markersize = 0.5, rng)
-        graphplot(A; nodeweights = 1:4, rng)
-        graphplot(A; curvaturescalar = 0, rng)
-        graphplot(A; el = Dict((1, 2) => ""), elb = true, rng)
-        graphplot(A; ew = (s, d, w) -> 3, rng)
-        graphplot(A; ses = 0.5, rng)
+        graphplot(A, markercolor = :red, markershape = :rect, markersize = 0.5, rng = rng)
+        graphplot(A, nodeweights = 1:4, rng = rng)
+        graphplot(A, curvaturescalar = 0, rng = rng)
+        graphplot(A, el = Dict((1, 2) => ""), elb = true, rng = rng)
+        graphplot(A, ew = (s, d, w) -> 3, rng = rng)
+        graphplot(A, ses = 0.5, rng = rng)
     end
 end
 
-cd(joinpath(@__DIR__, "..", "assets")) do
-    @testset "FIGURES" begin
-        @plottest random_labelled_graph() "random_labelled_graph.png" popup = !isci() tol =
-            itol()
-
-        @plottest random_3d_graph() "random_3d_graph.png" popup = !isci() tol = itol()
-
-        @plottest light_graphs() "light_graphs.png" popup = !isci() tol = itol()
+# -----------------------------------------
+# marginalhist
 
-        @plottest directed() "directed.png" popup = !isci() tol = itol()
+# using Distributions
+# n = 1000
+# x = rand(RNG, Gamma(2), n)
+# y = -0.5x + randn(RNG, n)
+# marginalhist(x, y)
 
-        @plottest marker_properties() "marker_properties.png" popup = !isci() tol = itol()
+# -----------------------------------------
+# portfolio composition map
 
-        @plottest edgelabel() "edgelabel.png" popup = !isci() tol = itol()
+# # fake data
+# tickers = ["IBM", "Google", "Apple", "Intel"]
+# N = 10
+# D = length(tickers)
+# weights = rand(RNG, N, D)
+# weights ./= sum(weights, 2)
+# returns = sort!((1:N) + D*randn(RNG, N))
 
-        @plottest selfedges() "selfedges.png" popup = !isci() tol = itol()
+# # plot it
+# portfoliocomposition(weights, returns, labels = tickers')
 
-        @plottest multigraphs() "multigraphs.png" popup = !isci() tol = itol()
-
-        @plottest arc_chord_diagrams() "arc_chord_diagrams.png" popup = !isci() tol = itol()
-
-        @plottest ast_example() "ast_example.png" popup = !isci() tol = itol()
-
-        @plottest julia_type_tree() "julia_type_tree.png" popup = !isci() tol = itol(2.0e-2)
-        @plottest julia_dict_tree() "julia_dict_tree.png" popup = !isci() tol = itol()
-
-        @plottest funky_edge_and_marker_args() "funky_edge_and_marker_args.png" popup =
-            !isci() tol = itol()
-
-        @plottest custom_nodeshapes_single() "custom_nodeshapes_single.png" popup = !isci() tol =
-            itol()
-
-        @plottest custom_nodeshapes_various() "custom_nodeshapes_various.png" popup =
-            !isci() tol = itol()
-    end
-
-    @testset "README" begin
-        @plottest julia_logo_pun() "readme_julia_logo_pun.png" popup = !isci() tol = itol()
-    end
-end
+# -----------------------------------------
+#

PlotsBase/Project.toml

@@ -102,7 +102,7 @@ Printf = "1"
 PythonPlot = "1"
 Random = "1"
 REPL = "1"
-RecipesBase = "1.3.1"
+RecipesBase = "1.4.0"
 RecipesPipeline = "1"
 Reexport = "1"
 Scratch = "1"

PlotsBase/ext/GRExt.jl

@@ -1,6 +1,6 @@
 module GRExt
 
-import PlotsBase: PlotsBase, PrecompileTools, RecipesPipeline, _cycle
+import PlotsBase: PlotsBase, PrecompileTools, RecipesPipeline
 
 import NaNMath
 import GR
@@ -331,11 +331,11 @@ function gr_getcolorind(c)
     return convert(Int, GR.inqcolorfromrgb(red(c), green(c), blue(c)))
 end
 
-gr_set_linecolor(c) = GR.setlinecolorind(gr_getcolorind(_cycle(c, 1)))
-gr_set_fillcolor(c) = GR.setfillcolorind(gr_getcolorind(_cycle(c, 1)))
-gr_set_markercolor(c) = GR.setmarkercolorind(gr_getcolorind(_cycle(c, 1)))
-gr_set_bordercolor(c) = GR.setbordercolorind(gr_getcolorind(_cycle(c, 1)))
-gr_set_textcolor(c) = GR.settextcolorind(gr_getcolorind(_cycle(c, 1)))
+gr_set_linecolor(c::Colorant) = GR.setlinecolorind(gr_getcolorind(c))
+gr_set_fillcolor(c::Colorant) = GR.setfillcolorind(gr_getcolorind(c))
+gr_set_markercolor(c::Colorant) = GR.setmarkercolorind(gr_getcolorind(c))
+gr_set_bordercolor(c::Colorant) = GR.setbordercolorind(gr_getcolorind(c))
+gr_set_textcolor(c::Colorant) = GR.settextcolorind(gr_getcolorind(c))
 gr_set_transparency(α::Real) = GR.settransparency(clamp(α, 0, 1))
 gr_set_transparency(::Nothing) = GR.settransparency(1)
 gr_set_transparency(c, α) = gr_set_transparency(α)
@@ -518,7 +518,7 @@ function gr_polaraxes(rmin::Real, rmax::Real, sp::Subplot)
     # draw radial ticks
     yaxis[:showaxis] && for i in eachindex(rtick_values)
         r = (rtick_values[i] - rmin) / (rmax - rmin)
-        (r ≤ 1 && r ≥ 0) && gr_text(GR.wctondc(0.05, r)..., _cycle(rtick_labels, i))
+        (r ≤ 1 && r ≥ 0) && gr_text(GR.wctondc(0.05, r)..., _getvalue(rtick_labels, i))
     end
     GR.restorestate()
     return nothing
@@ -1290,7 +1290,7 @@ function gr_add_legend(sp, leg, viewport_area)
                     1,
                     min(max_markersize, mfac * msz),
                     min(max_markersize, mfac * msw),
-                    _cycle(msh, 1),
+                    _getvalue(msh, 1),
                 )
             end
 
@@ -2029,8 +2029,8 @@ function gr_draw_segments(series, x, y, z, fillrange, clims)
         if is2d && fillrange ≢ nothing
             (fc = get_fillcolor(series, clims, i)) |> gr_set_fillcolor
             gr_set_fillstyle(get_fillstyle(series, i))
-            fx = _cycle(x, vcat(rng, reverse(rng)))
-            fy = vcat(_cycle(fr_from, rng), _cycle(fr_to, reverse(rng)))
+            fx = _getvalue(x, vcat(rng, reverse(rng)))
+            fy = vcat(_getvalue(fr_from, rng), _getvalue(RecipesBase.cycle(fr_to), reverse(rng)))
             gr_set_transparency(fc, get_fillalpha(series, i))
             GR.fillarea(fx, fy)
         end
@@ -2068,18 +2068,18 @@ function gr_draw_markers(
         rng = intersect(eachindex(IndexLinear(), x), segment.range)
         isempty(rng) && continue
         i = segment.attr_index
-        ms = get_thickness_scaling(series) * _cycle(msize, i)
-        msw = get_thickness_scaling(series) * _cycle(strokewidth, i)
-        shape = _cycle(shapes, i)
+        ms = get_thickness_scaling(series) * _getvalue(msize, i)
+        msw = get_thickness_scaling(series) * _getvalue(strokewidth, i)
+        shape = _getvalue(shapes, i)
         if !(shape isa Shape)
             shape = gr_get_markershape.(shape)
         end
         for j in rng
             gr_draw_marker(
                 series,
-                _cycle(x, j),
-                _cycle(y, j),
-                _cycle(z, j),
+                _getvalue(x, j),
+                _getvalue(y, j),
+                _getvalue(z, j),
                 clims,
                 i,
                 ms,

PlotsBase/ext/GastonExt.jl

@@ -338,7 +338,7 @@ function gaston_add_series(plt::Plot{GastonBackend}, series::Series)
     if gsp.dims == 2 && z ≡ nothing
         for (n, seg) in enumerate(series_segments(series, st; check = true))
             i, rng = seg.attr_index, seg.range
-            fr = _cycle(series[:fillrange], 1:length(x[rng]))
+            fr = _getattr(series, :fillrange, 1:length(x[rng]))
             for sc in gaston_seriesconf!(sp, series, n == 1, i)
                 push!(curves, Gaston.Curve(x[rng], y[rng], nothing, fr, sc))
             end
@@ -785,8 +785,8 @@ gaston_lc_ls_lw(series::Series, clims, i::Int) = (
 )
 
 gaston_mk_ms_mc(series::Series, clims, i::Int) = (
-    gaston_marker(_cycle(series[:markershape], i), get_markeralpha(series, i)),
-    0.2_cycle(series[:markersize], i),
+    gaston_marker(_getattr(series, :markershape, i), get_markeralpha(series, i)),
+    0.2 * _getattr(series, :markersize, i),
     gaston_color(get_markercolor(series, clims, i), get_markeralpha(series, i)),
 )