Skip to content
@KCCG

Kinghorn Centre for Clinical Genomics

Popular repositories Loading

  1. ClinSV ClinSV Public

    Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data

    Perl 66 8

  2. mity mity Public

    Forked from clareputtick/mity

    mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data

    Python 36 3

  3. rageseq rageseq Public

    RAGE-seq scripts

    Perl 18 3

  4. seave seave Public

    Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores and annotations from popular disease databases. Seave stores…

    HTML 16 3

  5. introme introme Public

    Shell 6

  6. vcfscope-measure vcfscope-measure Public

    Measure the performance of a genomic analysis pipeline

    Perl 2 2

Repositories

Showing 10 of 27 repositories
  • mity Public Forked from clareputtick/mity

    mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data

    KCCG/mity’s past year of commit activity
    Python 36 MIT 4 4 0 Updated Dec 18, 2024
  • ClinSV Public

    Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data

    KCCG/ClinSV’s past year of commit activity
    Perl 66 8 22 0 Updated Sep 4, 2024
  • phenomics-devops Public

    Phenomics code and Jenkins dev-ops setup

    KCCG/phenomics-devops’s past year of commit activity
    Python 1 GPL-3.0 0 0 4 Updated Dec 8, 2022
  • rageseq Public

    RAGE-seq scripts

    KCCG/rageseq’s past year of commit activity
    Perl 18 3 3 0 Updated Aug 30, 2021
  • genomics-r-intro Public Forked from datacarpentry/genomics-r-intro

    Intro to R and RStudio for Genomics

    KCCG/genomics-r-intro’s past year of commit activity
    Python 0 90 0 0 Updated Apr 23, 2021
  • KCCG/wrangling-genomics’s past year of commit activity
    Python 0 152 0 0 Updated Mar 19, 2021
  • KCCG/shell-genomics’s past year of commit activity
    Python 0 189 0 0 Updated Mar 12, 2021
  • fast5_fetcher Public Forked from Psy-Fer/fast5_fetcher

    A tool for fetching nanopore fast5 files after filtering via demultiplexing, alignment, or other, to improve downstream processing efficiency

    KCCG/fast5_fetcher’s past year of commit activity
    Python 1 MIT 4 0 1 Updated Feb 13, 2019
  • phenomics-subscription-worker Public

    A java dcokerized runnable scheduled to perform subscribed searches and send notifications

    KCCG/phenomics-subscription-worker’s past year of commit activity
    Java 0 GPL-3.0 0 0 0 Updated Oct 5, 2018
  • KCCG/phenomics-notification’s past year of commit activity
    Java 0 GPL-3.0 0 0 0 Updated Oct 5, 2018

Top languages

Loading…

Most used topics

Loading…