refer to dic for redshift/sncode #12
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| name: Run end-to-end tests | |
| on: | |
| pull_request: | |
| push: | |
| workflow_dispatch: | |
| # schedule: | |
| # # Run every Sunday at 04:53 UTC | |
| # - cron: 53 4 * * 0 | |
| jobs: | |
| tests: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.8 | |
| - name: Install package inside virtual environment | |
| run: | | |
| python3.8 -m venv venv | |
| source venv/bin/activate | |
| python -m pip install -U pip setuptools | |
| python -m pip install . | |
| - name: Run pipeline for SNPCC | |
| run: | | |
| source venv/bin/activate | |
| ./tests/run-snpcc-e2e.sh |