Add CI configuration #5

	name: CI

	on:
	push:
	branches:
	- master
	- 'v[0-9]*'
	tags:
	- 'v[0-9]*'
	pull_request:

	concurrency:
	group: ${{ github.workflow }}-${{ github.event.pull_request.number \|\| github.ref }}
	cancel-in-progress: true

	jobs:
	tests:
	strategy:
	matrix:
	python_version: ["3.9", "3.10", "3.11", "3.12"]
	os: [ubuntu-latest, windows-latest, macos-14]
	exclude:
	- os: macos-14
	python_version: "3.9"
	runs-on: ${{ matrix.os }}
	steps:
	- uses: actions/checkout@v4
	- name: Choose Python version ${{ matrix.python_version }}
	uses: actions/setup-python@v5
	with:
	python-version: '${{ matrix.python_version }}'
	- name: install the package
	run: python3 -m pip install .[test]
	- name: run pytest
	run: pytest --cov=microscope_calibration --cov-report=xml --cov-report=term tests/
	- name: submit code coverage
	uses: codecov/codecov-action@v4
	env:
	CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

	numba_coverage:
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4
	- name: 'Choose Python version 3.12'
	uses: actions/setup-python@v5
	with:
	python-version: '3.12'
	- name: install the package
	run: python3 -m pip install .[test]
	- name: run pytest
	run: NUMBA_DISABLE_JIT=1 pytest --cov=microscope_calibration --cov-report=xml --cov-report=term tests/
	- name: submit code coverage
	uses: codecov/codecov-action@v4
	env:
	CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

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