Search results

containers for Wochenende

Status: Open.

#99 In MHH-RCUG/nf_wochenende;

· colindaven opened on Nov 2, 2024

Interpretation of Wochenende Results

Status: Open.

#98 In MHH-RCUG/nf_wochenende;

· arpit20328 opened on Mar 25, 2024

implement dynamic mismatch filter for long reads based on read length

Status: Open.

#96 In MHH-RCUG/nf_wochenende;

· colindaven opened on Feb 9, 2023

Add samtools coverage viz

Status: Open.

#95 In MHH-RCUG/nf_wochenende;

· colindaven opened on Jan 5, 2023

Filter out bwa mem PE poor alignments

Status: Open.

#94 In MHH-RCUG/nf_wochenende;

· colindaven opened on Nov 25, 2022

fastp PE read output bug

Status: Open.

#92 In MHH-RCUG/nf_wochenende;

· colindaven opened on Nov 22, 2022

PE reads - bwa mem alignment and softclipping issues

Status: Open.

#88 In MHH-RCUG/nf_wochenende;

· colindaven opened on Nov 11, 2022

for minimap2 remove secondary alignments by default

Status: Open.

#80 In MHH-RCUG/nf_wochenende;

· colindaven opened on Sep 29, 2022

multiqc

Status: Open.

#75 In MHH-RCUG/nf_wochenende;

· LisaHollstein opened on Aug 26, 2022

metagenome data for testing

Status: Open.

#65 In MHH-RCUG/nf_wochenende;

· irosenboom opened on Aug 19, 2022

wochenende alignment fails if nodup not set up - duplicates

Status: Open.

#58 In MHH-RCUG/nf_wochenende;

· colindaven opened on Aug 12, 2022

human reads

Status: Open.

#57 In MHH-RCUG/nf_wochenende;

· LisaHollstein opened on Aug 11, 2022