mark test_hdf5_filters as flaky
#504
Workflow file for this run
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| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Pyfive Test | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| schedule: | |
| - cron: '0 0 * * *' # nightly | |
| # Required shell entrypoint to have properly configured bash shell | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| jobs: | |
| build: | |
| name: Test Python ${{ matrix.python-version }} | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.10", "3.11", "3.12", "3.13", "3.14"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| activate-environment: pyfive | |
| environment-file: environment.yml | |
| python-version: ${{ matrix.python-version }} | |
| miniforge-version: "latest" | |
| use-mamba: true | |
| - name: Install Pyfive Test Mode | |
| run: | | |
| mamba install -c conda-forge pip | |
| pip install -e .[test] | |
| - name: Lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Check environment contents | |
| run: | | |
| conda list | |
| pip list | |
| - name: Test with pytest | |
| run: | | |
| # pytest tries to split test_threadsafe_data_access.py | |
| # and that can not be run with eg pytest -n N | |
| pytest --cov --cov-branch --cov-report=xml | |
| - uses: codecov/codecov-action@v5 |