restructuring book to relfect reproducible schedule + adding metadaa …

…lesson qmd

materials/_quarto.yml

@@ -28,23 +28,24 @@ book:
   chapters:
     - index.qmd # preface 
     - session_01.qmd # ADC intro
-    - session_02.qmd # r setup 
+    - session_02.qmd # r & git setup 
     - session_03.qmd # Literate analysis
-    - session_04.qmd # DMP + Documenting and publishing data
-    - session_05.qmd # Intro to Git
-    - session_06.qmd # data modeling essentials
-    - session_07.qmd # Cleaning and Wrangling 
-    - session_08.qmd # collaborating with git
-    - session_09.qmd # publising to the web
-    - session_10.qmd # intro data viz
-    - session_11.qmd # practice session
-    - session_12.qmd # Data Portals
-    - session_13.qmd # Social Aspects of collab
-    - session_14.qmd # Functions and Packages
-    - session_15.qmd # Practice Session
-    - session_16.qmd # Spatial Data
-    - session_17.qmd # Repro and Provenance
-    - session_18.qmd 
+    - session_04.qmd # DMP
+    - session_05.qmd # Documenting and publishing data
+    - session_06.qmd # Intro to Git
+    - session_07.qmd # data modeling essentials
+    - session_08.qmd # Cleaning and Wrangling 
+    - session_09.qmd # collaborating with git
+    - session_10.qmd # publising to the web
+    - session_11.qmd # intro data viz
+    - session_12.qmd # practice session
+    - session_13.qmd # Data Portals
+    - session_14.qmd # Thinking Preferences
+    - session_15.qmd # Social Aspects of collab
+    - session_16.qmd # Functions and Packages
+    - session_17.qmd # Practice Session II
+    - session_18.qmd # Spatial Data
+    - session_19.qmd # Repro and Provenance
 
 
 bibliography: book.bib

materials/session_02.qmd

@@ -1,9 +1,14 @@
 ---
-title: "RStudio Server Setup"
+title: "RStudio & git Setup"
 title-block-banner: true
 
 ---
 
 
 {{< include /sections/rstudio-server-setup.qmd >}}
 
+
+{{< include /sections/git-setup.qmd >}}
+
+
+

materials/session_03.qmd

@@ -1,9 +1,9 @@
 ---
-title: "Introduction to R Programming"
+title: "Literate Analysis"
 title-block-banner: true
 execute: 
   eval: false
 ---
 
-{{< include /sections/intro-r-programming.qmd >}}
+{{< include /sections/r-intro-quarto.qmd >}}
 

materials/session_04.qmd

@@ -1,20 +1,20 @@
 ---
-title: "Thinking Preferences & Social Aspects of Collaboration"
+title: "Data Managment Plans"
 title-block-banner: true
-execute: 
-  eval: false
-format:
-  html:
-    code-link: true
-    code-fold: true
-    code-summary: "Answer"
-    code-overflow: wrap
+# execute: 
+#   eval: false
+# format:
+#   html:
+#     code-link: true
+#     code-fold: true
+#     code-summary: "Answer"
+#     code-overflow: wrap
 ---
 
 
 
 
-{{< include /sections/collaboration-thinking-preferences.qmd >}}
+{{{< include /sections/data-management-plans-reduced.qmd >}}
 
 
 {{< include /sections/collaboration-social-data-policies.qmd >}}

materials/session_05.qmd

@@ -1,6 +1,6 @@
 ---
-title: "Writing Data Management Plans"
+title: "Documenting and Publishing Data"
 title-block-banner: true
 ---
 
-{{< include /sections/data-management-plans-reduced.qmd >}}
+{{< include /sections/metadata-adc-data-documentation-hands-on.qmd >}}

materials/session_06.qmd

@@ -1,6 +1,6 @@
 ---
-title: "Literate Analysis with Quarto"
+title: "Introduction to git and GitHub"
 title-block-banner: true
 ---
 
-{{< include /sections/r-intro-quarto.qmd >}}
+{{< include /sections/git-github-intro.qmd >}}

materials/session_07.qmd

@@ -1,5 +1,5 @@
 ---
-title: "R Practice: Literate Analysis "
+title: "Data Modeling Essentials "
 title-block-banner: true
 execute:
   eval: false
@@ -15,4 +15,4 @@ execute:
 
 
 
-{{< include /sections/exercise-intro-programming-socialsci.qmd >}}
+{{< include /sections/intro-tidy-data.qmd >}}

materials/session_08.qmd

@@ -1,5 +1,5 @@
 ---
-title: "Data Modeling Essentials"
+title: "Cleaning and Wrangling Data"
 title-block-banner: true
 format:
   html:
@@ -9,4 +9,4 @@ format:
 
 
 
-{{< include /sections/data-modeling-socialsci.qmd >}}
+{{< include /sections/clean-wrangle-data.qmd >}}

materials/session_09.qmd

@@ -1,17 +1,17 @@
 ---
-title: "Cleaning and Wrangling Data"
+title: "Collaborating with git and GitHub"
 title-block-banner: true
-execute:
-  eval: false
-format:
-  html: 
-    code-link: true
-    code-fold: true
-    code-summary: "Answer"
-    code-overflow: wrap
+# execute:
+#   eval: false
+# format:
+#   html: 
+#     code-link: true
+#     code-fold: true
+#     code-summary: "Answer"
+#     code-overflow: wrap
 ---
 
 
-{{< include /sections/clean-wrangle-data.qmd >}}
+{{< include /sections/git-collab-merge-conflict.qmd >}}
 
 

materials/session_10.qmd

@@ -1,12 +1,12 @@
 ---
-title: "Intro to Data Visualization"
+title: "Publishing you Analysis to the Web"
 title-block-banner: true
 format:
   html:
     code-overflow: wrap
 ---
 
 
-{{< include /sections/visualization-ggplot-leaflet.qmd >}}
+{{< include /sections/git-github-publishing-analysis.qmd >}}
 
 

materials/session_11.qmd

@@ -1,8 +1,8 @@
 ---
-title: "Ethical Data Collection"
+title: "Intro to Data Visualization"
 title-block-banner: true
 ---
 
 
 
-{{< include /sections/data-ethics-eloka-2023.qmd >}}
+{{< include /sections/visualization-ggplot-leaflet.qmd >}}

materials/session_12.qmd

@@ -1,9 +1,15 @@
 ---
-title: "R Practice: Cleaning and Wrangling"
+title: "Practice Session I"
 title-block-banner: true
 execute:
   eval: false
+format:
+  html:
+    code-link: true
+    code-fold: true
+    code-summary: "Answer"
+    code-overflow: wrap
 ---
 
 
-{{< include /sections/exercise-tidyverse-socialsci.qmd >}}
+<!--{{< include /sections/exercise-tidyverse-socialsci.qmd >}}-->

materials/session_13.qmd

@@ -1,5 +1,5 @@
 ---
-title: "Working with Text Data in R"
+title: "Data Portals"
 title-block-banner: true
 # execute:
 #   eval: false
@@ -13,4 +13,4 @@ title-block-banner: true
 
 
 
-{{< include /sections/intro-tidy-text-data.qmd >}}
+{{< include /sections/adc-creating-data-portals.qmd >}}

materials/session_14.qmd

@@ -1,8 +1,8 @@
 ---
-title: "Metadata Best Practices and Data Publishing"
+title: "Thinking Preferences"
 title-block-banner: true
 ---
 
 
 
-{{< include /sections/metadata-adc-data-documentation-socialsci.qmd >}}
+{{< include /sections/collaboration-thinking-preferences.qmd >}}

materials/session_15.qmd

@@ -1,11 +1,11 @@
 ---
-title: "Creating Data Portals"
+title: "Social Aspects of Collaboration"
 title-block-banner: true
 format:
   html: 
     code-link: true
     code-overflow: wrap
 ---
 
-{{< include /sections/adc-creating-data-portals.qmd >}}
+{{< include /sections/collaboration-social-data-policies.qmd >}}
 

materials/session_16.qmd

@@ -1,5 +1,5 @@
 ---
-title: "Reproducible Survey Workflow"
+title: "Functions and Packages"
 title-block-banner: true
 execute:
   eval: false
@@ -11,5 +11,5 @@ format:
     code-overflow: wrap
 ---
 
-{{< include /sections/survey-workflow.qmd >}}
+<!--{{< include /sections/survey-workflow.qmd >}}__>
 

materials/session_17.qmd

@@ -1,8 +1,8 @@
 ---
-title: "Provenance and Reproducibility"
+title: "Practice Session II"
 title-block-banner: true
 ---
 
 
 
-{{< include /sections/provenance-reproducibility-datapaper.qmd >}}
+<!--{{< include /sections/provenance-reproducibility-datapaper.qmd >}}-->

materials/session_18.qmd

@@ -1,8 +1,8 @@
 ---
-title: "U.S Census Data in R"
+title: "Spatial Data"
 title-block-banner: true
 ---
 
 
 
-{{< include /sections/census-data.qmd >}}
+<!--{{< include /sections/census-data.qmd >}}-->