Skip to content

Commit

Permalink
Merge pull request #400 from NFDI4Chem/localisation
Browse files Browse the repository at this point in the history
Localisation
  • Loading branch information
jliermann authored Oct 25, 2024
2 parents 5429172 + d717942 commit 7a065f1
Show file tree
Hide file tree
Showing 2 changed files with 9 additions and 9 deletions.
Original file line number Diff line number Diff line change
Expand Up @@ -24,7 +24,7 @@ _Authors should add the PID of their corresponding dataset(s) to the data availa
For corresponding data, i.e. directly underlying the results reported in the article, add the PID to the article's [data availability statement](/docs/data_availability_statement), or a similarly termed section. In order to specifically reference and cite your data within the text, add your dataset to the references as well.

:::danger Notice:
This distinction is important, because **the link** to the dataset in CrossRef's DOI metadata of scientific articles **is differently set**, depending on whether the dataset is a directly related source of information or a specifically referenced resource.
This distinction is important, because **the link** to the dataset in Crossref's DOI metadata of scientific articles **is differently set**, depending on whether the dataset is a directly related source of information or a specifically referenced resource.
:::

#### How to use dataset PIDs for datasets by other researchers in scientific articles
Expand All @@ -49,7 +49,7 @@ Research data repositories offer the option to add a related identifier to link
_Researchers should link their datasets to be published to their corresponding articles using the relation type `IsSupplementTo`._
:::

According to the [DataCite Metadata Schema](https://datacite-metadata-schema.readthedocs.io/en/4.5/appendices/appendix-1/relationType/), [`IsCitedBy`](https://datacite-metadata-schema.readthedocs.io/en/4.5/appendices/appendix-1/relationType/#iscitedby) and [`IsSupplementTo`](https://datacite-metadata-schema.readthedocs.io/en/4.5/appendices/appendix-1/relationType/#issupplementto) are both recommended for discovery. For published articles, [CrossRef's documentation on relationships](https://www.crossref.org/documentation/schema-library/markup-guide-metadata-segments/relationships/) recommends that `isSupplmenetTo` should be used to link datasets generated as part of research results. Please note that some repositories automatically detect whether the linked object is an article or some other dataset published in another repository, and therefore don't require authors to specify a relation(ship) type.
According to the [DataCite Metadata Schema](https://datacite-metadata-schema.readthedocs.io/en/4.5/appendices/appendix-1/relationType/), [`IsCitedBy`](https://datacite-metadata-schema.readthedocs.io/en/4.5/appendices/appendix-1/relationType/#iscitedby) and [`IsSupplementTo`](https://datacite-metadata-schema.readthedocs.io/en/4.5/appendices/appendix-1/relationType/#issupplementto) are both recommended for discovery. For published articles, [Crossref's documentation on relationships](https://www.crossref.org/documentation/schema-library/markup-guide-metadata-segments/relationships/) recommends that `isSupplmenetTo` should be used to link datasets generated as part of research results. Please note that some repositories automatically detect whether the linked object is an article or some other dataset published in another repository, and therefore don't require authors to specify a relation(ship) type.

### Usage of Collection DOIs

Expand All @@ -59,7 +59,7 @@ _Researchers should use the Collection DOI provided by a repository in the data

Field-specific research data repositories may provide DOIs to reference individual chemical reactions, molecules, and their analytical data. Generic, multidisciplinary research data repositories provide DOIs for a whole published datasets, while more than one published dataset may be relevant to study results published via an article. In other words, many DOIs may be relevant to a published article, whereas **a data availability statement may provide some DOIs but not many DOIs**.

To facilitate the process of manuscript submission and article publication, researchers should add the **Collection DOI** provided by the repository to the data availability statement. This will ensure that all data underlying a published manuscript can be linked to an article in the data availability statement and the CrossRef metadata of that article.
To facilitate the process of manuscript submission and article publication, researchers should add the **Collection DOI** provided by the repository to the data availability statement. This will ensure that all data underlying a published manuscript can be linked to an article in the data availability statement and the Crossref metadata of that article.

If individual reactions, molecules, or analytical data should be referenced, add the DOIs of these individual research objects to the reference section and cite within the text accordingly.

Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -27,13 +27,15 @@ To assist authors in selecting **well-established and community-specific [reposi

[Templates](/docs/data_availability_statement/#templates-for-data-availability-statements) for [**data availability statements**](/docs/data_availability_statement) or a similarly termed section should also be added to the manuscript submission system. Once a template has been selected by the submitter, the data availability statement should be editable to allow authors to add additional information, such as what data are included in the dataset, similar to what is currently often mentioned in the section on supporting information PDF files. The submission system should then require the submitter to provide the necessary information, such as the DOI (specified as [DOI name](https://www.doi.org/doi-handbook/HTML/doi-name-syntax2.html) e.g. `10.1000/182` or as a URL i.e. including a resolver e.g. `https://doi.org/10.1000/182` ), repository name, third party name and contact information, or reasons for restricted access and information on how to access a dataset, depending on the template used.

### Link datasets to articles in CrossRef DOI metadata
### Link datasets to articles in Crossref DOI metadata

:::tip Standard
*Journals should use the information available in data availability statements to enhance CrossRef DOI metadata by linking articles to datasets.*
*Journals should use the information available in data availability statements to enhance Crossref DOI metadata by linking articles to datasets.*
:::

With the DOI and repository name in hand, journals should enrich CrossRef DOI metadata of articles published following the [FAIR](/docs/fair/) principles (e.g [F2](/docs/fair/#f2-data-are-described-with-rich-metadata-defined-by-r1-below), [I3](/docs/fair/#i3-metadata-include-qualified-references-to-other-metadata)). This establishes a structured **link** between the DOI of the article and the DOI of the dataset and ensures humans and machines alike can interpret the relationship between the published objects. For CrossRef metadata, a `related_item` should be added to mention the name of the repository (equal to `publisher` in the corresponding dataset DataCite DOI metadata).
With the DOI and repository name in hand, journals should enrich Crossref DOI metadata of articles published following the [FAIR](/docs/fair/) principles (e.g [F2](/docs/fair/#f2-data-are-described-with-rich-metadata-defined-by-r1-below), [I3](/docs/fair/#i3-metadata-include-qualified-references-to-other-metadata)). This establishes a structured **link** between the DOI of the article and the DOI of the dataset and ensures humans and machines alike can interpret the relationship between the published objects. For Crossref metadata, a `related_item` should be added to mention the name of the repository (equal to `publisher` in the corresponding dataset DataCite DOI metadata).

In agreement with [Crossref's documentation on **linking datasets** to published items](https://www.crossref.org/documentation/schema-library/markup-guide-metadata-segments/relationships/), the relationship type `isSupplementedBy` should be used.

In XML:
```xml
Expand All @@ -49,8 +51,6 @@ identifier-type="doi">10.prefix/suffix
</rel:program>
```

In agreement with [Crossref's documentation on **linking datasets** to published items](https://www.crossref.org/documentation/schema-library/markup-guide-metadata-segments/relationships/), the relationship type `isSupplementedBy` should be used.

### Add data publications to prior publication policy

:::tip Standard
Expand Down Expand Up @@ -88,4 +88,4 @@ To assist in automated workflows, such as linking the datasets to the published
[**Scholix**](https://doi.org/10.1045/january2017-burton) provides the framework for improving the links between scientific literature and research data as well as between data and data with the goal of providing a **high-level interoperability framework for exchanging information about these links**. Thus, Scholix hubs, such as [DataCite](https://datacite.org/) or [OpenAire](https://www.openaire.eu/), contribute information on their metadata records, which contain information on connected digital objects. This information should be used by academic publishers to discover datasets that correspond to an article but were published after the article was published, which allows the metadata of the article to be updated with links to the dataset (see above).

----
Main authors: [ORCID:0000-0003-4480-8661](https://orcid.org/0000-0003-4480-8661), [ORCID: 0000-0002-6243-2840](https://orcid.org/0000-0002-6243-2840)
Main authors: [ORCID:0000-0003-4480-8661](https://orcid.org/0000-0003-4480-8661), [ORCID: 0000-0002-6243-2840](https://orcid.org/0000-0002-6243-2840)

0 comments on commit 7a065f1

Please sign in to comment.