Github unit testing workflow using CTSM container #3

	name: Run fates unit tests with ctsm as the hos land model

	on:
	pull_request:

	jobs:
	ctsm-unit-test:
	runs-on: ubuntu-latest
	container:
	image: ghcr.io/ngeet/containers/unit-test-ctsm:latest
	env:
	BRANCH_NAME: ${{ github.head_ref }}
	BRANCH_URL: ${{ github.event.pull_request.head.repo.html_url }}

	steps:
	- name: Checkout code with git-fleximod
	run: \|
	cd /CTSM
	./bin/git-fleximod update

	- name: Set up conda environment
	uses: conda-incubator/setup-miniconda@v2
	with:
	activate-environment: testing
	environment-file: testing/testing.yml
	channels: conda-forge, defaults

	- name: Activate spack environment and run tests
	run: \|
	. /opt/spack-environment/activate.sh
	echo "HOSTNAME: $HOSTNAME"
	echo "HOME: $HOME"
	echo "CIMEROOT: $CIMEROOT"
	echo "NETCDF_FORTRAN_PATH: $NETCDF_FORTRAN_PATH"
	echo "NETCDF_C_PATH: $NETCDF_C_PATH"
	cd testing/
	python run_unit_tests.py --test-list fire_fuel

Provide feedback