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Apptainer container run troubleshooting

Insang Song edited this page Nov 19, 2024 · 1 revision

Objective

  • To build a knowledge base of container run errors for faster errorshooting

Errors

Can't find beethoven from the library paths [path1], [path2], ..., [any paths in .libPaths()]

  • As of November 19, 2024 (KST), in some branches in a target, beethoven is not loaded albeit development version of beethoven is installed in [path1], while other branches worked
  • Resolved when the image is rebuilt with the up-to-date development version of beethoven

Targets are not invalidated by apptainer run [image] Rscript -e "targets::tar_invalidate([target_name])"

  • Tracking in progress