README.md: update with link to doxygen documentation #928
Workflow file for this run
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# This is a GitHub actions workflow for WW3. | |
# | |
# This workflow builds with the Intel compilers. | |
# | |
# Matt Masarik, Alex Richert, Ed Hartnett | |
name: Intel Linux Build | |
on: [push, pull_request, workflow_dispatch] | |
# Cancel in-progress workflows when pushing to a branch | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | |
cancel-in-progress: true | |
# Set I_MPI_CC/F90 so Intel MPI wrapper uses icc/ifort instead of gcc/gfortran | |
env: | |
cache_key: intel10-3 | |
CC: icc | |
FC: ifort | |
CXX: icpc | |
I_MPI_CC: icc | |
I_MPI_F90: ifort | |
# Split into a dependency build step, and a WW3 build step which | |
# builds multiple switches in a matrix. The setup is run once and | |
# the environment is cached so each build of WW3 can share the dependencies. | |
jobs: | |
setup: | |
runs-on: ubuntu-latest | |
steps: | |
- name: checkout-ww3 | |
if: steps.cache-env.outputs.cache-hit != 'true' | |
uses: actions/checkout@v3 | |
with: | |
path: ww3 | |
# Cache spack, OASIS, and compiler | |
# No way to flush Action cache, so key may have # appended | |
- name: cache-env | |
id: cache-env | |
uses: actions/cache@v3 | |
with: | |
path: | | |
spack | |
~/.spack | |
work_oasis3-mct | |
/opt/intel | |
key: spack-${{ runner.os }}-${{ env.cache_key }}-${{ hashFiles('ww3/model/ci/spack_intel.yaml') }} | |
- name: install-intel-compilers | |
if: steps.cache-env.outputs.cache-hit != 'true' | |
run: | | |
wget https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | |
sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | |
echo "deb https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list | |
sudo apt-get update | |
sudo apt-get install intel-oneapi-dev-utilities intel-oneapi-mpi-devel intel-oneapi-compiler-fortran-2023.2.1 intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic-2023.2.1 intel-oneapi-openmp | |
# Build WW3 spack environment | |
- name: install-dependencies-with-spack | |
if: steps.cache-env.outputs.cache-hit != 'true' | |
run: | | |
sudo mv /usr/local /usr/local_mv | |
# Install NetCDF, ESMF, g2, etc using Spack | |
. /opt/intel/oneapi/setvars.sh | |
git clone -c feature.manyFiles=true https://github.com/JCSDA/spack.git | |
source spack/share/spack/setup-env.sh | |
ln -s $(realpath $(which gcc)) spack/lib/spack/env/intel/gcc # spack/make bug in ESMF | |
spack env create ww3-intel ww3/model/ci/spack_intel.yaml | |
spack env activate ww3-intel | |
spack compiler find | |
sudo apt install cmake | |
spack external find | |
spack config add "packages:mpi:require:'intel-oneapi-mpi'" | |
spack config add "packages:all:require:['%intel']" | |
spack concretize | |
spack install --dirty -v --fail-fast | |
spack clean --all | |
- name: build-oasis | |
if: steps.cache-env.outputs.cache-hit != 'true' | |
run: | | |
. /opt/intel/oneapi/setvars.sh | |
source spack/share/spack/setup-env.sh | |
spack env activate ww3-intel | |
export WWATCH3_DIR=${GITHUB_WORKSPACE}/ww3/model | |
export OASIS_INPUT_PATH=${GITHUB_WORKSPACE}/ww3/regtests/ww3_tp2.14/input/oasis3-mct | |
export OASIS_WORK_PATH=${GITHUB_WORKSPACE}/ww3/regtests/ww3_tp2.14/input/work_oasis3-mct | |
cd ww3/regtests/ww3_tp2.14/input/oasis3-mct/util/make_dir | |
cmake . | |
make | |
cp -r ${GITHUB_WORKSPACE}/ww3/regtests/ww3_tp2.14/input/work_oasis3-mct ${GITHUB_WORKSPACE} | |
build: | |
needs: setup | |
strategy: | |
matrix: | |
switch: [Ifremer1, NCEP_st2, NCEP_st4, ite_pdlib, NCEP_st4sbs, NCEP_glwu, OASACM, UKMO, MULTI_ESMF] | |
runs-on: ubuntu-latest | |
steps: | |
- name: checkout-ww3 | |
uses: actions/checkout@v3 | |
with: | |
path: ww3 | |
- name: cache-env | |
id: cache-env | |
uses: actions/cache@v3 | |
with: | |
path: | | |
spack | |
~/.spack | |
work_oasis3-mct | |
/opt/intel | |
key: spack-${{ runner.os }}-${{ env.cache_key }}-${{ hashFiles('ww3/model/ci/spack_intel.yaml') }} | |
- name: build-ww3 | |
run: | | |
sudo mv /usr/local /usr/local_mv | |
sudo apt install cmake | |
. /opt/intel/oneapi/setvars.sh | |
source spack/share/spack/setup-env.sh | |
spack env activate ww3-intel | |
cd ww3 | |
export CC=mpiicc | |
export FC=mpiifort | |
export OASISDIR=${GITHUB_WORKSPACE}/work_oasis3-mct | |
mkdir build && cd build | |
if [[ ${{ matrix.switch }} == "MULTI_ESMF" ]]; then | |
cmake .. -DMULTI_ESMF=ON -DSWITCH=multi_esmf | |
else | |
cmake .. -DSWITCH=${{ matrix.switch }} | |
fi | |
make -j2 VERBOSE=1 |