Add unit test for existing point output I/O code #66
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: io_gnu | |
| on: [push, pull_request, workflow_dispatch] | |
| # Cancel in-progress workflows when pushing to a branch | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | |
| cancel-in-progress: true | |
| env: | |
| cache_key: gnu11-1 | |
| CC: gcc-10 | |
| FC: gfortran-10 | |
| CXX: g++-10 | |
| # Split into a steup step, and a WW3 build step which | |
| # builds multiple switches in a matrix. The setup is run once and | |
| # the environment is cached so each build of WW3 can share the dependencies. | |
| jobs: | |
| setup: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: checkout-ww3 | |
| if: steps.cache-env.outputs.cache-hit != 'true' | |
| uses: actions/checkout@v3 | |
| with: | |
| path: ww3 | |
| # Cache spack, OASIS, and compiler | |
| # No way to flush Action cache, so key may have # appended | |
| - name: cache-env | |
| id: cache-env | |
| uses: actions/cache@v3 | |
| with: | |
| path: | | |
| spack | |
| ~/.spack | |
| work_oasis3-mct | |
| key: spack-${{ runner.os }}-${{ env.cache_key }}-${{ hashFiles('ww3/model/ci/spack_gnu.yaml') }} | |
| # Build WW3 spack environment | |
| - name: install-dependencies-with-spack | |
| if: steps.cache-env.outputs.cache-hit != 'true' | |
| run: | | |
| # Install NetCDF, ESMF, g2, etc using Spack | |
| sudo apt install cmake | |
| git clone -c feature.manyFiles=true https://github.com/JCSDA/spack.git | |
| source spack/share/spack/setup-env.sh | |
| spack env create ww3-gnu ww3/model/ci/spack_gnu.yaml | |
| spack env activate ww3-gnu | |
| spack compiler find | |
| spack external find cmake | |
| spack add [email protected] | |
| spack concretize | |
| spack install --dirty -v | |
| - name: build-oasis | |
| if: steps.cache-env.outputs.cache-hit != 'true' | |
| run: | | |
| source spack/share/spack/setup-env.sh | |
| spack env activate ww3-gnu | |
| export WWATCH3_DIR=${GITHUB_WORKSPACE}/ww3/model | |
| export OASIS_INPUT_PATH=${GITHUB_WORKSPACE}/ww3/regtests/ww3_tp2.14/input/oasis3-mct | |
| export OASIS_WORK_PATH=${GITHUB_WORKSPACE}/ww3/regtests/ww3_tp2.14/input/work_oasis3-mct | |
| cd ww3/regtests/ww3_tp2.14/input/oasis3-mct/util/make_dir | |
| cmake . | |
| make VERBOSE=1 | |
| cp -r ${GITHUB_WORKSPACE}/ww3/regtests/ww3_tp2.14/input/work_oasis3-mct ${GITHUB_WORKSPACE} | |
| io_gnu: | |
| needs: setup | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: install-dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install doxygen gcovr valgrind | |
| - name: checkout-ww3 | |
| uses: actions/checkout@v3 | |
| with: | |
| path: ww3 | |
| - name: cache-env | |
| id: cache-env | |
| uses: actions/cache@v3 | |
| with: | |
| path: | | |
| spack | |
| ~/.spack | |
| work_oasis3-mct | |
| key: spack-${{ runner.os }}-${{ env.cache_key }}-${{ hashFiles('ww3/model/ci/spack_gnu.yaml') }} | |
| - name: build-ww3 | |
| run: | | |
| source spack/share/spack/setup-env.sh | |
| spack env activate ww3-gnu | |
| set -x | |
| cd ww3 | |
| export CC=mpicc | |
| export FC=mpif90 | |
| export OASISDIR=${GITHUB_WORKSPACE}/work_oasis3-mct | |
| mkdir build && cd build | |
| export LD_LIBRARY_PATH="/home/runner/work/WW3/WW3/spack/var/spack/environments/ww3-gnu/.spack-env/view/:$LD_LIBRARY_PATH" | |
| cmake -DSWITCH=${GITHUB_WORKSPACE}/ww3/regtests/unittests/data/switch.io -DCMAKE_BUILD_TYPE=Debug -DCMAKE_Fortran_FLAGS="-g -fprofile-abs-path -fprofile-arcs -ftest-coverage -O0 -Wall -fno-omit-frame-pointer -fsanitize=address" -DCMAKE_C_FLAGS="-g -fprofile-abs-path -fprofile-arcs -ftest-coverage -O0 -Wall -fno-omit-frame-pointer -fsanitize=address" .. | |
| make -j2 VERBOSE=1 | |
| ./bin/ww3_grid | |
| mv mod_def.ww3 regtests/unittests | |
| ctest --verbose --output-on-failure --rerun-failed | |
| gcovr --root .. -v --html-details --exclude ../regtests/unittests --exclude CMakeFiles --print-summary -o test-coverage.html &> /dev/null | |
| - name: upload-test-coverage | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: ww3-test-coverage | |
| path: | | |
| ww3/build/*.html | |
| ww3/build/*.css | |