Add line to dockerfile to point image to use cran repo for dependencies #38

	name: CI
	on:
	push:
	workflow_dispatch:
	jobs:
	build:
	runs-on: ubuntu-20.04
	env:
	AWS_S3_ENDPOINT: ${{ secrets.AWS_S3_ENDPOINT }}
	AWS_ACCESS_KEY_ID: ${{ secrets.AWS_ACCESS_KEY_ID }}
	AWS_SECRET_ACCESS_KEY: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
	steps:
	- uses: actions/checkout@v2

	- name: Set version
	id: version
	shell: bash
	run: \|
	source version.env
	echo "$VERSION"
	echo ::set-output name=version::$VERSION

	- name: Install Minio
	run: \|
	curl -O https://dl.min.io/client/mc/release/linux-amd64/mc
	sudo chmod +x mc
	sudo mv ./mc /usr/bin
	mc alias set spaces $AWS_S3_ENDPOINT $AWS_ACCESS_KEY_ID $AWS_SECRET_ACCESS_KEY --api S3v4

	- name: Build docker image
	run: \|
	docker build --tag pad-normalize .

	- name: Build dataset!
	env:
	VERSION: ${{ steps.version.outputs.version }}
	run: \|
	docker run --user $(id -u):$(id -g) \
	-v $(pwd)/data:/usr/local/src/scripts/data pad-normalize $VERSION

	- name: Upload!
	if: github.ref == 'refs/heads/main'
	env:
	VERSION: ${{ steps.version.outputs.version }}
	run: ./push-to-bucket.sh

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