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BehaviorSpace Extension for NetLogo

The BehaviorSpace extension allows you to create and run BehaviorSpace experiments from NetLogo code. You can use the extension alone or in combination with the GUI BehaviorSpace tool, and you can run experiments created in the GUI tool with the extension.

Using the BehaviorSpace Extension

To use the BehaviorSpace extension in a model, include the following line at the top of your code:

extensions [bspace]

If you are already using another extension, you can just add bspace to the list inside the square brackets.

Once the extension is loaded, you can use it to run experiments from anywhere in the code. Note that experiments created in the code will persist for the duration of the current NetLogo session if not cleared with the bspace:clear-experiments command (see bspace:clear-experiments).

Experiments created in the code will have the following default values:

Pre Experiment Commands: empty Setup Commands: empty Go Commands: empty Post Run Commands: empty Post Experiment Commands: empty Repetitions: 1 Sequential Run Order: true Run Metrics Every Step: true Run Metrics Condition: empty Time Limit: 0 Stop Condition: empty Metrics: empty Variables: empty Threads: determined by number of processor cores Recommended Max Threads: determined by number of processor cores Table: empty Spreadsheet: empty Stats: empty Lists: empty Update View: true Update Plots And Monitors: true

Any properties can also be set explicitly to other default values. For code blocks, you can specify "do nothing" with an empty pair of square brackets.

Primitives

Experiment Management

bspace:create-experiment bspace:delete-experiment bspace:run-experiment bspace:rename-experiment bspace:duplicate-experiment bspace:import-experiments bspace:export-experiment bspace:clear-experiments bspace:set-current-experiment bspace:get-experiments bspace:get-current-experiment bspace:get-parameters bspace:experiment-exists bspace:valid-experiment-name

Setting Experiment Parameters

bspace:set-variables bspace:set-repetitions bspace:set-sequential-run-order bspace:set-metrics bspace:set-run-metrics-every-step bspace:set-run-metrics-condition bspace:set-pre-experiment-commands bspace:set-setup-commands bspace:set-go-commands bspace:set-stop-condition bspace:set-post-run-commands bspace:set-post-experiment-commands bspace:set-time-limit

Getting Experiment Parameters

bspace:get-variables bspace:get-repetitions bspace:get-sequential-run-order bspace:get-metrics bspace:get-run-metrics-every-step bspace:get-run-metrics-condition bspace:get-pre-experiment-commands bspace:get-setup-commands bspace:get-go-commands bspace:get-stop-condition bspace:get-post-run-commands bspace:get-post-experiment-commands bspace:get-time-limit

Setting Experiment Run Conditions

bspace:set-spreadsheet bspace:set-table bspace:set-stats bspace:set-lists bspace:set-update-view bspace:set-update-plots bspace:set-parallel-runs

Getting Experiment Run Conditions

bspace:get-spreadsheet bspace:get-table bspace:get-stats bspace:get-lists bspace:get-update-view bspace:get-update-plots bspace:get-parallel-runs

Processing BehaviorSpace Output

bspace:get-output-metric

Experiment Information

bspace:goto-behaviorspace-documentation bspace:goto-bspace-extension-documentation bspace:get-default-parallel-runs bspace:get-recommended-max-parallel-runs

bspace:create-experiment

bspace:create-experiment string boolean

Create a new experiment specified in the first input. If an experiment already exists with that name and the second input is true, that experiment will be overwritten with the default experiment. If an experiment already exists with that name and the second input is false, an error will be thrown.

Example:

bspace:create-experiment "my-experiment" true

bspace:delete-experiment

bspace:delete-experiment string

Delete the experiment specified in the first input. An error will be thrown if the specified experiment does not exist.

Example:

bspace:delete-experiment "my-experiment"

bspace:run-experiment

bspace:run-experiment

Run the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:run-experiment

bspace:rename-experiment

bspace:rename-experiment string

Rename the current working experiment to the name specified in the first input. An error will be thrown if no current working experiment has been set.

Example:

bspace:rename-experiment "another-experiment"

bspace:duplicate-experiment

bspace:duplicate-experiment string

Make a copy of the current working experiment and rename the copy to the name specified in the first input, then set the current working experiment to the new experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:duplicate-experiment "my-experiment-copy"

bspace:import-experiments

bspace:import-experiments string

Import the experiments contained in the file at the specified location. An error will be thrown for each experiment that has a name that already exists, but the remaining experiments will be succesfully imported.

Example:

bspace:import-experiments "/Users/hacker53/Documents/experiments.xml"

bspace:export-experiment

bspace:export-experiment string boolean

Export the current working experiment to the file specified in the second input. If that file already exists and the second input is true, it will be overwritten with the specified experiment. If that file already exists and the second input is false, an error will be thrown.

Example:

bspace:export-experiment "/Users/hacker53/Documents/my-experiment.xml"

bspace:clear-experiments

bspace:clear-experiments

Clear the list of stored experiments that have been created in the code, and reset all experiments that have been paused after running from the code. The model and all experiments created in the GUI will remain unchanged.

Example:

bspace:clear-experiments

bspace:set-current-experiment

bspace:set-current-experient string

Set the current working experiment to the name specified in the first input.

Example:

bspace:set-current-experiment "my-experiment"

bspace:get-experiments

bspace:get-experiments

Report a list of all BehaviorSpace experiments created programmatically, followed by all BehaviorSpace experiments created in the GUI.

bspace:get-current-experiment

bspace:get-current-experiment

Report the name of the current working experiment.

bspace:get-parameters

bspace:get-parameters string

Report the parameter values for the experiment with the name specified in the first input. An error will be thrown if no experiment exists with the specified name.

Example:

bspace:get-parameters "my-experiment"

Sample output:

EXPERIMENT PARAMETERS:

Variable values:
	
Repetitions:
	1
Sequential run order:
	true
Metrics:
	List("count turtles")
Run metrics every step:
	true
Run metrics condition:
	
Pre experiment commands:
	
Setup commands:
    setup
	
Go commands:
    go
	
Post run commands:
	
Post experiment commands:
	
Stop condtion:
	
Time limit:
	0

RUN OPTIONS:

Spreadsheet:
	
Table:
	
Stats:
	
Lists:
	
Update view:
	true
Update plots:
	true
Parallel runs:
	6

bspace:experiment-exists

bspace:experiment-exists string

Report whether an experiment exists with the name specified in the first input.

Example:

bspace:experiment-exists "my-experiment"

bspace:valid-experiment-name

bspace:valid-experiment-name string

Report whether the specified name is a valid experiment name.

Example:

bspace:valid-experiment-name "" ; false
bspace:valid-experiment-name "my-experiment" ; true

bspace:create-experiment "my-experiment" true
bspace:valid-experiment-name "my-experiment" false

bspace:set-variables

bspace:set-variables list of strings

Set the variables to vary for the current working experiment. Each element of the input list should contain one constant or sub-experiment specification. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-variables [ "[ 'var1' 0 5 20 ]" ]

bspace:set-repetitions

bspace:set-repetitions number

Set the repetitions for the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-repetitions 3

bspace:set-sequential-run-order

bspace:set-sequential-run-order boolean

Set whether the current working experiment uses sequential run order. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-sequential-run-order true

bspace:set-metrics

bspace:set-metrics list

Set the metrics commands for the current working experiment. An error will be thrown if no current working experiment has been set. The first input must be a list of string commands.

Example:

bspace:set-metrics [ "count turtles", "count patches" ]

bspace:set-run-metrics-every-step

bspace:set-run-metrics-every-step boolean

Set whether the current working experiment runs metrics every step. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-run-metrics-every-step false

bspace:set-run-metrics-condition

bspace:set-run-metrics-condition anonymous reporter

Set the run metrics condition for the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-run-metrics-condition [ count turtles < 5 ]

bspace:set-pre-experiment-commands

bspace:set-pre-experiment-commands anonymous command

Set the pre-experiment commands for the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-pre-experiment-commands [ clear-all ]

bspace:set-setup-commands

bspace:set-setup-commands anonymous command

Set the setup commands for the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-setup-commands [ clear-all create-turtles 50 ]

bspace:set-go-commands

bspace:set-go-commands anonymous command

Set the go commands for the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-go-commands [ myFunction ]

bspace:set-stop-condition

bspace:set-stop-condition anonymous reporter

Set the stop condition for the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-stop-condition [ ticks > 1000 ]

bspace:set-post-run-commands

bspace:set-post-run-commands anonymous command

Set the post-run commands for the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-post-run-commands [ print count turtles ]

bspace:set-post-experiment-commands

bspace:set-post-experiment-commands anonymous command

Set the post-experiment commands for the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-post-experiment-commands [ ask turtles [ setxy 0 0 ] ]

bspace:set-time-limit

bspace:set-time-limit number

Set the time limit in ticks for the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-time-limit 1500

bspace:get-variables

bspace:get-variables

Report the variables for the current working experiment. An error will be thrown if no current working experiment has been set.

bspace:get-repetitions

bspace:get-repetitions

Report the repetitions for the current working experiment. An error will be thrown if no current working experiment has been set.

bspace:get-sequential-run-order

bspace:get-sequential-run-order

Report whether the current working experiment uses sequential run order. An error will be thrown if no current working experiment has been set.

bspace:get-metrics

bspace:get-metrics

Report the metrics for the current working experiment. An error will be thrown if no current working experiment has been set.

bspace:get-run-metrics-every-step

bspace:get-run-metrics-every-step

Report whether the current working experiment runs metrics every step. An error will be thrown if no current working experiment has been set.

bspace:get-run-metrics-condition

bspace:get-run-metrics-condition

Report the run metrics condition for the current working experiment. An error will be thrown if no current working experiment has been set.

bspace:get-pre-experiment-commands

bspace:get-pre-experiment-commands

Report the pre-experiment commands for the current working experiment. An error will be thrown if no current working experiment has been set.

bspace:get-setup-commands

bspace:get-setup-commands

Report the setup commands for the current working experiment. An error will be thrown if no current working experiment has been set.

bspace:get-go-commands

bspace:get-go-commands

Report the go commands for the current working experiment. An error will be thrown if no current working experiment has been set.

bspace:get-stop-condition

bspace:get-stop-condition

Report the stop condition for the current working experiment. An error will be thrown if no current working experiment has been set.

bspace:get-post-run-commands

bspace:get-post-run-commands

Report the post-run commands for the current working experiment. An error will be thrown if no current working experiment has been set.

bspace:get-post-experiment-commands

bspace:get-post-experiment-commands

Report the post-experiment commands for the current working experiment. An error will be thrown if no current working experiment has been set.

bspace:get-time-limit

bspace:get-time-limit

Report the time limit for the current working experiment. An error will be thrown if no current working experiment has been set.

bspace:set-spreadsheet

bspace:set-spreadsheet string

Set the path for the spreadsheet file for the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-spreadsheet "/Users/hacker53/Documents/exp-sheet.csv"

bspace:set-table

bspace:set-table string

Set the path for the table file for the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-table "/Users/hacker53/Documents/exp-table.csv"

bspace:set-stats

bspace:set-stats string

Set the path for the stats file for the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-stats "/Users/hacker53/Documents/exp-stats.csv"

bspace:set-lists

bspace:set-lists string

Set the path for the lists file for the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-lists "/Users/hacker53/Documents/exp-lists.csv"

bspace:set-update-view

bspace:set-update-view boolean

Set whether the current working experiment should update the view. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-update-view true

bspace:set-update-plots

bspace:set-update-view boolean

Set whether the current working experiment should update the plots. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-update-view false

bspace:set-parallel-runs

bspace:set-parallel-runs number

Set the number of parallel runs for the current working experiment. An error will be thrown if no current working experiment has been set.

Example:

bspace:set-parallel-runs 3

bspace:get-spreadsheet

bspace:get-spreadsheet

Report the spreadsheet location for the current working experiment. An error will be thrown if no current working experiment has been set. Will report an empty string if no spreadsheet file was specified in the current working experiment, or the string "-" if the output is directed to standard output.

bspace:get-table

bspace:get-table

Report the table location for the current working experiment. An error will be thrown if no current working experiment has been set. Will report an empty string if no table file was specified in the current working experiment, or the string "-" if the output is directed to standard output.

bspace:get-stats

bspace:get-stats

Report the stats location for the current working experiment. An error will be thrown if no current working experiment has been set. Will report an empty string if no spreastatsdsheet file was specified in the current working experiment, or the string "-" if the output is directed to standard output.

bspace:get-lists

bspace:get-lists

Report the lists location for the current working experiment. An error will be thrown if no current working experiment has been set. Will report an empty string if no lists file was specified in the current working experiment, or the string "-" if the output is directed to standard output.

bspace:get-update-view

bspace:get-update-view

Report whether the current working experiment will update the view. An error will be thrown if no current working experiment has been set.

bspace:get-update-plots

bspace:get-update-plots

Report whether the current working experiment will update the plots. An error will be thrown if no current working experiment has been set.

bspace:get-parallel-runs

bspace:get-parallel-runs

Report the number of parallel runs for the current working experiment. An error will be thrown if no current working experiment has been set.

bspace:get-output-metric

bspace:get-output-metric string string number

Report the list of values for the metric specified in the second input for the run number specified in the third input, from the file specified in the first input. The specified file must be a spreadsheet output to ensure proper ordering of values. An error will be thrown if any of the inputs are invalid.

Example:

bspace:get-output-metric "/Users/hacker53/Documents/spreadsheet.csv" "count turtles" 3

bspace:goto-behaviorspace-documentation

bspace:goto-behaviorspace-documentation

Open the BehaviorSpace documentation page in a browser window.

bspace:goto-bspace-extension-documentation

bspace:goto-bspace-extension-documentation

Open the bspace extension documentation page in a browser window.

bspace:get-default-parallel-runs

bspace:get-default-parallel-runs

Report the default number of parallel runs for the current device.

bspace:get-recommended-max-parallel-runs

bspace:get-recommended-max-parallel-runs

Report the recommended maximum number of parallel runs for the current device.

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