🚀 Automatically rebuilt derived files

OBOFoundry · Nov 6, 2024 · 5ce2fb8 · 5ce2fb8
1 parent e19b467
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Showing 4 changed files with 1,119 additions and 1,074 deletions.
diff --git a/_config.yml b/_config.yml
@@ -894,6 +894,20 @@ ontologies:
         Program.'
     type: annotation
     user: https://hubmapconsortium.org/
+  - description: The single-cell transcriptomics platform CZ CELLxGENE uses CL to
+      annotate all cell types. All datasets on CellXGene are annotated according to
+      a standard schema that specifies the use of CL to record Cell Type.
+    examples:
+    - description: A CELLxGENE Cell Guide entry for 'luminal adaptive secretory precursor
+        cell of mammary gland', which includes the CL ID (CL:4033057), CL definition
+        and a visualizer of CL hierarchy
+      url: https://cellxgene.cziscience.com/cellguide/CL:4033057
+    publications:
+    - id: https://doi.org/10.1101/2021.04.05.438318
+      title: 'CELLxGENE: a performant, scalable exploration platform for high dimensional
+        sparse matrices'
+    type: annotation
+    user: https://cellxgene.cziscience.com/
   - description: The Human Cell Atlas (HCA) is an international group of researchers
       using a combination of these new technologies to create cellular reference maps.
       The HCA use CL to annotate cells in their reference maps.

diff --git a/registry/ontologies.jsonld b/registry/ontologies.jsonld
@@ -1221,6 +1221,23 @@
                     "type": "annotation",
                     "user": "https://hubmapconsortium.org/"
                 },
+                {
+                    "description": "The single-cell transcriptomics platform CZ CELLxGENE uses CL to annotate all cell types. All datasets on CellXGene are annotated according to a standard schema that specifies the use of CL to record Cell Type.",
+                    "examples": [
+                        {
+                            "description": "A CELLxGENE Cell Guide entry for 'luminal adaptive secretory precursor cell of mammary gland', which includes the CL ID (CL:4033057), CL definition and a visualizer of CL hierarchy",
+                            "url": "https://cellxgene.cziscience.com/cellguide/CL:4033057"
+                        }
+                    ],
+                    "publications": [
+                        {
+                            "id": "https://doi.org/10.1101/2021.04.05.438318",
+                            "title": "CELLxGENE: a performant, scalable exploration platform for high dimensional sparse matrices"
+                        }
+                    ],
+                    "type": "annotation",
+                    "user": "https://cellxgene.cziscience.com/"
+                },
                 {
                     "description": "The Human Cell Atlas (HCA) is an international group of researchers using a combination of these new technologies to create cellular reference maps. The HCA use CL to annotate cells in their reference maps.",
                     "examples": [