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Add WCON viewers #9

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Merged
merged 28 commits into from
Jul 25, 2025
Merged

Add WCON viewers #9

merged 28 commits into from
Jul 25, 2025

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pgleeson
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@pgleeson pgleeson commented May 6, 2025

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@pgleeson pgleeson requested a review from Copilot May 6, 2025 16:59
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Pull Request Overview

This PR adds new viewers and enhancements for handling WCON files in the worm simulation project.

  • Generate WCON files from simulation data
  • Introduce CSV-based and WCON-based viewers with CLI options
  • Add a plotting utility to generate PNG images from WCON data and update the build workflow

Reviewed Changes

Copilot reviewed 7 out of 10 changed files in this pull request and generated 1 comment.

Show a summary per file
File Description
WormSim/Model/generate_wcon.py New module to generate WCON files from simulation data
WormSim/Model/WormViewCSV.py New CSV-based viewer for rendering simulation data
WormSim/Model/WormView.py Updated WCON viewer with additional CLI options and perimeter generation logic
WormSim/Model/WormPlot.py New viewer to generate PNG plots from WCON files
README.md Minor documentation update
.github/workflows/build.yml Workflow update to include jsonschema dependency
Files not reviewed (3)
  • WormSim/Model/simdata_test.csv: Language not supported
  • WormSim/Model/simdata_test.wcon: Language not supported
  • WormSim/Model/test_all.sh: Language not supported
Comments suppressed due to low confidence (1)

WormSim/Model/WormViewCSV.py:30

  • [nitpick] Consider renaming the variable 'Objects' to 'objects' to adhere to Python naming conventions.
Objects = genfromtxt("objects.csv", delimiter=",")

@pgleeson pgleeson merged commit 3b9542f into development Jul 25, 2025
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3 participants