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PKUWZP/Stochastic-Models-in-Computational-Biology

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This respository includes python and C++ functions for my research works on stochastic models of cellular biology.

The functions are listed below:

  1. Deterministic ODE solvers for NFkB/IkB signaling pathway models ( Det_Models_GeneNetwork.py)

  2. Power Spectrum analysis functions for the stochastic dynamics of time series (PowerSpectrum.py )

  3. Limit cycle dynamics of oscillatory systems. (LimitCycle.py)

  4. C++ Stochastic differential equation solver (nfkb_decoy_strip.cpp).

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Stochastic Simulations of Gene Regulatory Networks

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