Skip to content

PumasAI/SimpleChains.jl

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

SimpleChains

Stable Dev Build Status codecov-img

SimpleChains.jl only supports simple chains, but it intends to be fast for small problems on the CPU. Currently, valgrad! is the only means of extracting gradient information.

using SimpleChains, BenchmarkTools

# 24 covariates each per 200 observations
x = rand(24, 200); # 24 inputs per 200 observations

# 2 responses each per 200 observations
y = Matrix{Float64}(undef, 2, 200) .= randn.() .* 10;

schain = SimpleChain(
  static(24), # input dimension (optional)
  TurboDense{true}(tanh, 8), # dense layer with bias that maps to 8 outputs and applies `tanh` activation
  SimpleChains.Dropout(0.2), # dropout layer
  TurboDense{false}(identity, 2), # dense layer without bias that maps to 2 outputs and `identity` activation
  SquaredLoss(y)
);

p = SimpleChains.init_params(schain)
g = similar(p);

# Entirely in place evaluation
@benchmark valgrad!($g, $schain, $x, $p) # dropout active

For comparison, using Flux, we would write:

using Flux

chain = Chain(
  Dense(24, 8, tanh; bias = true),
  Flux.Dropout(0.2),
  Dense(8, 2, identity; bias = false)
);
chain.layers[2].active = true # activate dropout

ya = Array(y);

@benchmark gradient(Flux.params($chain)) do
  Flux.mse($chain($x), $ya)
end

Benchmark results:

julia> @benchmark valgrad!($g, $schain, $x, $p) # dropout active
BechmarkTools.Trial: 10000 samples with 6 evaluations.
 Range (min  max):  5.274 μs   33.075 μs  ┊ GC (min  max): 0.00%  0.00%
 Time  (median):     5.657 μs               ┊ GC (median):    0.00%
 Time  (mean ± σ):   5.646 μs ± 349.777 ns  ┊ GC (mean ± σ):  0.00% ± 0.00%
 Memory estimate: 0 bytes, allocs estimate: 0.
  
julia> @benchmark gradient(Flux.params($chain)) do
         Flux.mse($chain($x), $ya)
       end
BechmarkTools.Trial: 10000 samples with 1 evaluations.
 Range (min  max):   83.674 μs    4.865 ms  ┊ GC (min  max): 0.00%  93.21%
 Time  (median):      96.430 μs               ┊ GC (median):    0.00%
 Time  (mean ± σ):   106.897 μs ± 197.689 μs  ┊ GC (mean ± σ):  7.96% ±  4.22%
 Memory estimate: 182.55 KiB, allocs estimate: 316.