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Queen's Computational Systems Biology

We are an interdisciplinary and fast-moving academic research lab at Queen's University.

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  1. PROSO-Toolbox PROSO-Toolbox Public

    Forked from HerbertYao/PROSO-Toolbox

    MATLAB 3

  2. APRILE APRILE Public

    Forked from NYXFLOWER/APRILE

    APRILE: Adverse Polypharmacy Reaction Intelligent Learner and Explainer

    Python 1

  3. StressME StressME Public

    Python 1

  4. APRILE-Pred APRILE-Pred Public

    Forked from NYXFLOWER/APRILE-Pred

    PoSe-Model: A simplified TIP model for drug side effect prediction (Under development...)

    Jupyter Notebook

  5. APRILE-Exp APRILE-Exp Public

    Forked from NYXFLOWER/APRILE-Exp

    This is the repository for reproducing results on APRILE-Exp in the paper "APRILE: Exploring the Molecular Mechanisms of Drug Side Effects with Explainable Graph Neural Networks".

    Jupyter Notebook

  6. APRILE-CaseStudies APRILE-CaseStudies Public

    1

Repositories

Showing 10 of 10 repositories
  • FEM_GEM Public
    0 0 0 0 Updated Sep 3, 2024
  • OVERLAY-Toolbox Public archive Forked from HerbertYao/OVERLAY-Toolbox

    OVERLAY algorithm for context-specific GEM

    MATLAB 0 GPL-3.0 1 0 0 Updated Jan 13, 2024
  • MATLAB 3 GPL-3.0 1 0 0 Updated Dec 25, 2023
  • StressME Public
    Python 1 0 0 0 Updated Dec 22, 2023
  • iSD1509M Public
    Jupyter Notebook 0 0 0 0 Updated Jan 17, 2023
  • algal-pcFBA Public Forked from HerbertYao/algal-pcFBA
    Jupyter Notebook 0 1 0 0 Updated Jan 12, 2023
  • 0 GPL-3.0 1 0 0 Updated Dec 3, 2021
  • APRILE Public Forked from NYXFLOWER/APRILE

    APRILE: Adverse Polypharmacy Reaction Intelligent Learner and Explainer

    Python 1 MIT 4 0 0 Updated Oct 6, 2021
  • APRILE-Exp Public Forked from NYXFLOWER/APRILE-Exp

    This is the repository for reproducing results on APRILE-Exp in the paper "APRILE: Exploring the Molecular Mechanisms of Drug Side Effects with Explainable Graph Neural Networks".

    Jupyter Notebook 0 GPL-3.0 2 0 0 Updated Jul 3, 2021
  • APRILE-Pred Public Forked from NYXFLOWER/APRILE-Pred

    PoSe-Model: A simplified TIP model for drug side effect prediction (Under development...)

    Jupyter Notebook 0 MIT 1 0 0 Updated Mar 2, 2021