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15 changes: 10 additions & 5 deletions Project.toml
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
name = "HarmonicBalance"
uuid = "e13b9ff6-59c3-11ec-14b1-f3d2cc6c135e"
authors = ["Orjan Ameye <[email protected]>", "Jan Kosata <[email protected]>", "Javier del Pino <[email protected]>"]
version = "0.15.5"
version = "0.16.0"

[deps]
DocStringExtensions = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"
Expand All @@ -19,34 +19,39 @@ ModelingToolkit = "961ee093-0014-501f-94e3-6117800e7a78"
[extensions]
ModelingToolkitExt = "ModelingToolkit"

[sources]
HarmonicSteadyState = {url = "https://github.com/QuantumEngineeredSystems/HarmonicSteadyState.jl", rev = "MTKv10"}

[compat]
Aqua = "0.8.11"
DocStringExtensions = "0.9.4"
Documenter = "1.4"
ExplicitImports = "1.6"
HarmonicSteadyState = "0.2.1, 0.3"
HarmonicSteadyState = "0.4.0"
JET = "0.9.18, 0.10"
ModelingToolkit = "9.60"
ModelingToolkit = "10.6.0"
OrdinaryDiffEqTsit5 = "1.1"
PrecompileTools = "1.2"
QuestBase = "0.3.1"
Random = "1.10"
Reexport = "1.2.2"
SymbolicUtils = "3.25"
Symbolics = "6.34.0"
Test = "1.10"
julia = "1.10"
julia = "1.11"

[extras]
Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595"
Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
ExplicitImports = "7d51a73a-1435-4ff3-83d9-f097790105c7"
JET = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b"
ModelingToolkit = "961ee093-0014-501f-94e3-6117800e7a78"
OrdinaryDiffEqTsit5 = "b1df2697-797e-41e3-8120-5422d3b24e4a"
QuestBase = "7e80f742-43d6-403d-a9ea-981410111d43"
Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
SymbolicUtils = "d1185830-fcd6-423d-90d6-eec64667417b"
Symbolics = "0c5d862f-8b57-4792-8d23-62f2024744c7"
Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[targets]
test = ["Aqua", "JET", "SymbolicUtils", "Symbolics", "ExplicitImports", "Test", "Random", "ModelingToolkit", "Documenter", "QuestBase"]
test = ["Aqua", "JET", "SymbolicUtils", "Symbolics", "ExplicitImports", "Test", "Random", "ModelingToolkit", "Documenter", "QuestBase", "OrdinaryDiffEqTsit5"]
5 changes: 4 additions & 1 deletion docs/Project.toml
Original file line number Diff line number Diff line change
Expand Up @@ -26,4 +26,7 @@ Symbolics = "0c5d862f-8b57-4792-8d23-62f2024744c7"

[compat]
Documenter = "1"
julia = "1.9"
julia = "1.11"

[sources]
HarmonicSteadyState = {url = "https://github.com/QuantumEngineeredSystems/HarmonicSteadyState.jl", rev = "MTKv10"}
36 changes: 19 additions & 17 deletions ext/ModelingToolkitExt.jl
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@ module ModelingToolkitExt

using DocStringExtensions

export ODESystem, ODEProblem, SteadyStateProblem, NonlinearProblem
export System, ODEProblem, SteadyStateProblem, NonlinearProblem

using QuestBase:
is_rearranged, rearrange_standard, rearrange_standard!, is_rearranged_standard
Expand All @@ -14,14 +14,15 @@ using Symbolics:
simplify, Equation, substitute, Num, @variables, expand, unwrap, arguments, wrap
using ModelingToolkit:
ModelingToolkit,
ODESystem,
System,
ODEProblem,
NonlinearProblem,
SteadyStateProblem,
varmap_to_vars,
parameters,
unknowns,
@parameters,
@mtkbuild,
@mtkcompile,
@independent_variables

swapsides(eq::Equation) = Equation(eq.rhs, eq.lhs)
Expand All @@ -36,7 +37,7 @@ end
@doc """
$(TYPEDSIGNATURES)

Creates and ModelingToolkit.ODESystem from a HarmonicEquation.
Creates and ModelingToolkit.System from a HarmonicEquation.

### Example
```julia
Expand All @@ -49,12 +50,12 @@ diff_eq = DifferentialEquation(
add_harmonic!(diff_eq, x, ω) #
harmonic_eq = get_harmonic_equations(diff_eq)

sys = ODESystem(harmonic_eq)
sys = System(harmonic_eq)
param = (α => 1.0, ω0 => 1.1, F => 0.01, γ => 0.01, ω => 1.1)
ODEProblem(sys, [1.0, 0.0], (0, 100), param)
```
"""
function ModelingToolkit.ODESystem(eom::HarmonicEquation)
function ModelingToolkit.System(eom::HarmonicEquation)
if !is_rearranged(eom) # check if time-derivatives of the variable are on the right hand side
eom = rearrange_standard(eom)
end
Expand All @@ -74,15 +75,15 @@ function ModelingToolkit.ODESystem(eom::HarmonicEquation)
eqs = simplify.(expand.(eqs))
eqs = substitute(eqs, Dict(zip(eom.parameters, par_names)))

# ∨ mtk v9 need @mtkbuild
@mtkbuild sys = ODESystem(eqs, first(slow_time_ivp), vars, par_names)
# ∨ mtk v10 need @mtkcompile
@mtkcompile sys = System(eqs, first(slow_time_ivp), vars, par_names)
return sys
end

@doc """
$(TYPEDSIGNATURES)

Creates and ModelingToolkit.ODESystem from a DifferentialEquation.
Creates and ModelingToolkit.System from a DifferentialEquation.

### Example
```julia
Expand All @@ -92,14 +93,14 @@ using ModelingToolkit
diff_eq = DifferentialEquation(
d(x, t, 2) + ω0^2 * x + α * x^3 + γ * d(x, t) ~ F * cos(ω * t), x
)
sys = ODESystem(diff_eq)
sys = System(diff_eq)

param = (α => 1.0, ω0 => 1.1, F => 0.01, γ => 0.01, ω => 1.1)

ODEProblem(sys, [1.0, 0.0], (0, 100), param)
```
"""
function ModelingToolkit.ODESystem(diff_eq::DifferentialEquation)
function ModelingToolkit.System(diff_eq::DifferentialEquation)
diff_eq = deepcopy(diff_eq)
if !is_rearranged_standard(diff_eq)
rearrange_standard!(diff_eq)
Expand All @@ -120,7 +121,7 @@ function ModelingToolkit.ODESystem(diff_eq::DifferentialEquation)

eqs = substitute(eqs, Dict(zip(param_undeclared, params)))

@mtkbuild sys = ODESystem(eqs, first(iv), vars, params)
@mtkcompile sys = System(eqs, first(iv), vars, params)

return sys
end
Expand Down Expand Up @@ -160,12 +161,13 @@ function ModelingToolkit.ODEProblem(
in_place=true,
kwargs...,
)
sys = ODESystem(eom)
param = varmap_to_vars(p, parameters(sys))
sys = System(eom)
# param = varmap_to_vars(p, parameters(sys))
dict = merge(isempty(u0) ? Dict() : Dict(unknowns(sys) .=> u0), p)
if !in_place # out-of-place
prob = ODEProblem{false}(sys, u0, tspan, param; jac=true, kwargs...)
prob = ODEProblem{false}(sys, dict, tspan; jac=true, kwargs...)
else # in-place
prob = ODEProblem{true}(sys, u0, tspan, param; jac=true, kwargs...)
prob = ODEProblem{true}(sys, dict, tspan; jac=true, kwargs...)
end # compute jacobian for performance
return prob
end
Expand Down Expand Up @@ -220,7 +222,7 @@ SteadyStateProblem(harmonic_eq, [1.0, 0.0], param)
function ModelingToolkit.SteadyStateProblem(
eom::HarmonicEquation, u0, p::AbstractDict; in_place=true, kwargs...
)
sys = ODESystem(eom)
sys = System(eom)
param = varmap_to_vars(p, parameters(sys))
if !in_place # out-of-place
prob = SteadyStateProblem{false}(sys, u0, param; jac=true, kwargs...)
Expand Down
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