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COVID_IFR_Lusaka

The structure within Analysis is as follows:

R/      # functions used in analyses
Analysis/
    |
    ├── Code/           # analysis scripts used for generating figures
    |   ├── Data_handling.R
    │   ├── Figure_2_WHO_Estimates_Of_Excess_Mortality/
    │   ├── Figure_3_Burial_Registration_Patterns/
    │   ├── Figure_4_Estimating_Excess_Mortality/
    │   ├── Figure_5_Capturing_Patterns_Of_Transmission/
    │   ├── Figure_6_Varying_Severity/
    │   ├── SI/         # analysis scripts used for generating supplementary figures
    |
    ├── Data/
    │   ├── raw_data/       # data obtained from elsewhere
    │   └── derived_data/   # data generated during the analysis
    |
    ├── Figures/
    ├── Results/