[Auto-generated] Update dependencies #2440
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name: CD - Deploy documentation to GH Pages | |
on: | |
push: | |
branches: ["master"] | |
pull_request: | |
# Allows you to run this workflow manually from the Actions tab | |
workflow_dispatch: | |
# Sets permissions of the GITHUB_TOKEN to allow deployment to GitHub Pages | |
permissions: | |
contents: read | |
pages: write | |
id-token: write | |
# Allow one concurrent deployment | |
concurrency: | |
group: pages-${{ github.ref }} | |
cancel-in-progress: true | |
env: | |
ONTODOC_DIR: doc | |
BUILD_DIR: tmp | |
PUBLISH_DIR: pages | |
jobs: | |
compile: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout | |
uses: actions/checkout@v4 | |
- name: Setup Python 3.10 | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.10" | |
- name: Setup Pages | |
uses: actions/configure-pages@v5 | |
- name: Install system dependencies | |
run: | | |
sudo apt-get update --fix-missing | |
sudo apt-get install \ | |
libxml2-dev \ | |
libxslt-dev \ | |
libhdf5-dev \ | |
swig4.0 \ | |
doxygen \ | |
graphviz \ | |
python3 \ | |
python3-pip \ | |
python3-dev \ | |
python3-numpy \ | |
python3-yaml | |
#python3 -m pip install psycopg2-binary==2.9.5 | |
- name: Available version of installed programs | |
run: | | |
python --version | |
swig -version | |
doxygen --version | |
dot -V | |
- name: Install Python dependencies | |
run: | | |
pip install --upgrade pip | |
pip install -U setuptools wheel | |
pip install -r requirements.txt -r requirements_doc.txt | |
- name: Run CMAKE | |
run: | | |
mkdir -p build | |
cd build | |
Python3_ROOT=$(python3 -c 'import sys; print(sys.exec_prefix)') \ | |
CFLAGS='-Wno-missing-field-initializers' \ | |
cmake .. -DFORCE_EXAMPLES=ON -DWITH_DOC=ON | |
- name: Run MakeFile | |
run: make | |
working-directory: build | |
- name: Upload artifact | |
uses: actions/upload-pages-artifact@v3 | |
with: | |
path: 'build/doc/html/' | |
deploy: | |
if: github.event_name != 'pull_request' | |
environment: | |
name: github-pages | |
url: ${{ steps.deployment.outputs.page_url }} | |
runs-on: ubuntu-latest | |
needs: compile | |
steps: | |
- name: Deploy to GitHub Pages | |
id: deployment | |
uses: actions/deploy-pages@v4 |