Popular repositories Loading

1. Timesweeper Timesweeper Public

   Python package for detecting positive selective sweeps using time-series genomics sampling data.

   Python 20 2

2. Tree_learning Tree_learning Public

   Code for accurate inference of tree topologies from multiple sequence alignments using deep learning

   R 10 1

3. drosophila_phylogeny drosophila_phylogeny Public

   Pipeline overview and code (including BLT-DCT program) for widespread introgression across a phylogeny of 155 Drosophila genomes

   R 8 1

4. introNets introNets Public

   Python 6 1

5. TEforest TEforest Public

   Finding TEs with short-read data using random forests

   R 5 1

6. timesweeper-experiments timesweeper-experiments Public

   Repo for experiments for the TimeSweeper manuscript.

   Jupyter Notebook 4 1