SereDef / DNAm-clustering Public

Apply the EP-means clustering algorithm to cluster DNAm distributions

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Name		Name	Last commit message	Last commit date
Latest commit History 20 Commits
birth_450K_5cent_15maxk		birth_450K_5cent_15maxk
functional_analysis_results		functional_analysis_results
.gitignore		.gitignore
0.1.convert_to_fbm.R		0.1.convert_to_fbm.R
0.2.cpg_selection.R		0.2.cpg_selection.R
0.3.filter_and_batch_correction.R		0.3.filter_and_batch_correction.R
0.3.filter_and_batch_correction.sh		0.3.filter_and_batch_correction.sh
1.1.extract_distribution_moments.R		1.1.extract_distribution_moments.R
1.1.extract_distribution_moments.sh		1.1.extract_distribution_moments.sh
1.2.compute_range_centiles.R		1.2.compute_range_centiles.R
1.fit_epmeans.R		1.fit_epmeans.R
2.merge_cluster_files.R		2.merge_cluster_files.R
3.functional_analysis1_mqtls.R		3.functional_analysis1_mqtls.R
4.functional_analysis2_EWAScatalog.R		4.functional_analysis2_EWAScatalog.R
DNAm-clustering.Rproj		DNAm-clustering.Rproj
README.md		README.md
distrib_metad_450K_birth.csv		distrib_metad_450K_birth.csv
run_epmeans.sh		run_epmeans.sh
run_functional1.sh		run_functional1.sh
run_functional2.sh		run_functional2.sh