This workflow is used to demonstrate configuration layering as it relates to HPC job schedulers and profiles in Nextflow.
To run locally on Setonix:
module load nextflow/24.10.0
nextflow run main.nf
To run with slurm scheduler:
module load nextflow/24.10.0
nextflow run main.nf -profile slurm --slurm_account <provide-account>
To run locally on Gadi:
module load nextflow
nextflow run main.nf
To run with pbspro scheduler:
module load nextflow
nextflow run main.nf -profile pbspro --pbspro_account <provide-account>