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v1.3.1

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@TimD1 TimD1 released this 19 May 15:54
· 214 commits to master since this release

Improved support for monoploid/haploid contigs

  • ploidy is saved per contig and we ensure all variants on a contig are of the same ploidy
  • all summary VCFs now correctly output GT information with correct ploidy
  • if no GT field is found, monoploidy is assumed and a warning is printed