Set <table> to be ontology.Table not UncategorizedText #15126
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| name: CI | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| merge_group: | |
| branches: [ main ] | |
| permissions: | |
| id-token: write | |
| contents: read | |
| env: | |
| NLTK_DATA: ${{ github.workspace }}/nltk_data | |
| jobs: | |
| setup: | |
| strategy: | |
| matrix: | |
| python-version: ["3.9","3.10","3.11", "3.12"] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: ./.github/actions/base-cache | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| check-only: 'true' | |
| check-deps: | |
| strategy: | |
| matrix: | |
| python-version: ["3.9","3.10","3.11", "3.12"] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Check for dependency conflicts | |
| run: make check-deps | |
| check-extras: | |
| strategy: | |
| matrix: | |
| python-version: [ "3.9","3.10","3.11","3.12" ] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install all extras | |
| run: make check-extras | |
| check-licenses: | |
| strategy: | |
| matrix: | |
| python-version: [ "3.12" ] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| # NOTE(robinson) - dependencies are installed first because liccheck | |
| # produces an error if there is a a mismatch between the dep version | |
| # in the requirements file and the dep version in site packages | |
| - name: Install all doc and test dependencies | |
| run: | | |
| make install-ci | |
| make check-licenses | |
| lint: | |
| strategy: | |
| matrix: | |
| python-version: ["3.9","3.10","3.11"] | |
| runs-on: ubuntu-latest | |
| needs: [setup, changelog] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Setup virtual environment | |
| uses: ./.github/actions/base-cache | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Lint | |
| run: | | |
| source .venv/bin/activate | |
| make install-ci | |
| make check | |
| shellcheck: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: ShellCheck | |
| uses: ludeeus/action-shellcheck@master | |
| shfmt: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: setup shfmt | |
| uses: mfinelli/setup-shfmt@v3 | |
| - name: Run shfmt | |
| run: shfmt -i 2 -d . | |
| test_unit: | |
| strategy: | |
| matrix: | |
| python-version: ["3.9","3.10","3.11", "3.12"] | |
| runs-on: ubuntu-latest | |
| needs: [setup, lint] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Setup virtual environment | |
| uses: ./.github/actions/base-cache | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Test | |
| env: | |
| UNS_API_KEY: ${{ secrets.UNS_API_KEY }} | |
| TESSERACT_VERSION : "5.4.1" | |
| run: | | |
| source .venv/bin/activate | |
| sudo apt-get update | |
| sudo apt-get install -y libmagic-dev poppler-utils libreoffice | |
| sudo add-apt-repository -y ppa:alex-p/tesseract-ocr5 | |
| sudo apt-get update | |
| sudo apt-get install -y tesseract-ocr tesseract-ocr-kor | |
| tesseract --version | |
| installed_tesseract_version=$(tesseract --version | grep -oP '(?<=tesseract )\d+\.\d+\.\d+') | |
| if [ "$installed_tesseract_version" != "${{env.TESSERACT_VERSION}}" ]; then | |
| echo "Tesseract version ${{env.TESSERACT_VERSION}} is required but found version $installed_tesseract_version" | |
| exit 1 | |
| fi | |
| # FIXME (yao): sometimes there is cache but we still miss argilla in the env; so we add make install-ci again | |
| make install-ci | |
| make test CI=true UNSTRUCTURED_INCLUDE_DEBUG_METADATA=true | |
| make check-coverage | |
| test_unit_no_extras: | |
| strategy: | |
| matrix: | |
| python-version: ["3.10"] | |
| runs-on: ubuntu-latest | |
| needs: [setup, lint] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Setup virtual environment | |
| uses: ./.github/actions/base-cache | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Test | |
| env: | |
| UNS_API_KEY: ${{ secrets.UNS_API_KEY }} | |
| run: | | |
| source .venv/bin/activate | |
| make install-ci | |
| make install-nltk-models | |
| make test-no-extras CI=true | |
| test_unit_dependency_extras: | |
| # NOTE(newelh) - Split extras into separate steps in the same pipeline (avoid using matrix) | |
| strategy: | |
| matrix: | |
| python-version: ["3.10"] | |
| extra: ["csv", "docx", "odt", "markdown", "pypandoc", "pdf-image", "pptx", "xlsx"] | |
| runs-on: ubuntu-latest | |
| needs: [setup, lint, test_unit_no_extras] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - uses: actions/cache/restore@v4 | |
| id: virtualenv-cache | |
| with: | |
| path: | | |
| nltk_data | |
| key: unstructured-${{ runner.os }}-${{ matrix.python-version }}-${{ hashFiles('requirements/*.txt') }} | |
| - name: Setup virtual environment | |
| run: | | |
| python${{ matrix.python-version}} -m venv .venv-${{ matrix.extra }} | |
| source .venv-${{ matrix.extra }}/bin/activate | |
| make install-base-ci | |
| make install-${{ matrix.extra }} | |
| - name: Test | |
| env: | |
| UNS_API_KEY: ${{ secrets.UNS_API_KEY }} | |
| UNSTRUCTURED_HF_TOKEN: ${{ secrets.HF_TOKEN }} | |
| run: | | |
| source .venv-${{ matrix.extra }}/bin/activate | |
| # NOTE(newelh) - determine what needs to be installed here | |
| sudo apt-get update | |
| sudo apt-get install -y libmagic-dev poppler-utils libreoffice | |
| make install-pandoc | |
| sudo add-apt-repository -y ppa:alex-p/tesseract-ocr5 | |
| sudo apt-get update | |
| sudo apt-get install -y tesseract-ocr tesseract-ocr-kor | |
| tesseract --version | |
| make install-${{ matrix.extra }} | |
| make test-extra-${{ matrix.extra }} CI=true | |
| setup_ingest: | |
| strategy: | |
| matrix: | |
| python-version: [ "3.9","3.10" ] | |
| runs-on: ubuntu-latest | |
| needs: [setup] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: ./.github/actions/base-ingest-cache | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| check-only: 'true' | |
| test_ingest_src: | |
| strategy: | |
| matrix: | |
| python-version: ["3.9","3.10"] | |
| runs-on: ubuntu-latest-m | |
| needs: [setup_ingest, lint] | |
| steps: | |
| # actions/checkout MUST come before auth | |
| - uses: 'actions/checkout@v4' | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Get full Python version | |
| id: full-python-version | |
| run: echo version=$(python -c "import sys; print('-'.join(str(v) for v in sys.version_info))") >> $GITHUB_OUTPUT | |
| - name: Setup virtual environment | |
| uses: ./.github/actions/base-ingest-cache | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Setup docker-compose | |
| uses: KengoTODA/actions-setup-docker-compose@v1 | |
| with: | |
| version: '2.22.0' | |
| - name: Test (end-to-end) | |
| env: | |
| AIRTABLE_PERSONAL_ACCESS_TOKEN: ${{ secrets.AIRTABLE_PERSONAL_ACCESS_TOKEN }} | |
| BOX_APP_CONFIG: ${{ secrets.BOX_APP_CONFIG }} | |
| CONFLUENCE_API_TOKEN: ${{ secrets.CONFLUENCE_API_TOKEN }} | |
| CONFLUENCE_USER_EMAIL: ${{ secrets.CONFLUENCE_USER_EMAIL }} | |
| DISCORD_TOKEN: ${{ secrets.DISCORD_TOKEN }} | |
| DROPBOX_APP_KEY: ${{ secrets.DROPBOX_APP_KEY }} | |
| DROPBOX_APP_SECRET: ${{ secrets.DROPBOX_APP_SECRET }} | |
| DROPBOX_REFRESH_TOKEN: ${{ secrets.DROPBOX_REFRESH_TOKEN }} | |
| GCP_INGEST_SERVICE_KEY: ${{ secrets.GCP_INGEST_SERVICE_KEY }} | |
| GH_READ_ONLY_ACCESS_TOKEN: ${{ secrets.GH_READ_ONLY_ACCESS_TOKEN }} | |
| HUBSPOT_API_TOKEN: ${{ secrets.HUBSPOT_API_TOKEN }} | |
| JIRA_INGEST_API_TOKEN: ${{ secrets.JIRA_INGEST_API_TOKEN }} | |
| JIRA_INGEST_USER_EMAIL: ${{ secrets.JIRA_INGEST_USER_EMAIL }} | |
| MONGODB_URI: ${{ secrets.MONGODB_URI }} | |
| MONGODB_DATABASE_NAME: ${{ secrets.MONGODB_DATABASE_NAME }} | |
| MS_CLIENT_CRED: ${{ secrets.MS_CLIENT_CRED }} | |
| MS_CLIENT_ID: ${{ secrets.MS_CLIENT_ID }} | |
| MS_TENANT_ID: ${{ secrets.MS_TENANT_ID }} | |
| MS_USER_EMAIL: ${{ secrets.MS_USER_EMAIL }} | |
| MS_USER_PNAME: ${{ secrets.MS_USER_PNAME }} | |
| SALESFORCE_USERNAME: ${{secrets.SALESFORCE_USERNAME}} | |
| SALESFORCE_CONSUMER_KEY: ${{secrets.SALESFORCE_CONSUMER_KEY}} | |
| SALESFORCE_PRIVATE_KEY: ${{secrets.SALESFORCE_PRIVATE_KEY}} | |
| SHAREPOINT_CLIENT_ID: ${{secrets.SHAREPOINT_CLIENT_ID}} | |
| SHAREPOINT_CRED: ${{secrets.SHAREPOINT_CRED}} | |
| SHAREPOINT_SITE: ${{secrets.SHAREPOINT_SITE}} | |
| SHAREPOINT_PERMISSIONS_APP_ID: ${{secrets.SHAREPOINT_PERMISSIONS_APP_ID}} | |
| SHAREPOINT_PERMISSIONS_APP_CRED: ${{secrets.SHAREPOINT_PERMISSIONS_APP_CRED}} | |
| SHAREPOINT_PERMISSIONS_TENANT: ${{secrets.SHAREPOINT_PERMISSIONS_TENANT}} | |
| SLACK_TOKEN: ${{ secrets.SLACK_TOKEN }} | |
| UNS_API_KEY: ${{ secrets.UNS_API_KEY }} | |
| NOTION_API_KEY: ${{ secrets.NOTION_API_KEY }} | |
| AWS_SECRET_ACCESS_KEY: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | |
| AWS_ACCESS_KEY_ID: ${{ secrets.AWS_ACCESS_KEY_ID }} | |
| AZURE_SEARCH_ENDPOINT: ${{ secrets.AZURE_SEARCH_ENDPOINT }} | |
| AZURE_SEARCH_API_KEY: ${{ secrets.AZURE_SEARCH_API_KEY }} | |
| OPENAI_API_KEY: ${{ secrets.OPENAI_API_KEY }} | |
| OCTOAI_API_KEY: ${{ secrets.OCTOAI_API_KEY }} | |
| PINECONE_API_KEY: ${{secrets.PINECONE_API_KEY}} | |
| ASTRA_DB_APPLICATION_TOKEN: ${{secrets.ASTRA_DB_TOKEN}} | |
| ASTRA_DB_API_ENDPOINT: ${{secrets.ASTRA_DB_ENDPOINT}} | |
| MXBAI_API_KEY: ${{secrets.MXBAI_API_KEY}} | |
| OCR_AGENT: "unstructured.partition.utils.ocr_models.tesseract_ocr.OCRAgentTesseract" | |
| CI: "true" | |
| PYTHON: python${{ matrix.python-version }} | |
| run: | | |
| source .venv/bin/activate | |
| sudo apt-get update | |
| sudo apt-get install -y libmagic-dev poppler-utils libreoffice | |
| make install-pandoc | |
| sudo add-apt-repository -y ppa:alex-p/tesseract-ocr5 | |
| sudo apt-get update | |
| sudo apt-get install -y tesseract-ocr | |
| sudo apt-get install -y tesseract-ocr-kor | |
| sudo apt-get install diffstat | |
| tesseract --version | |
| make install-all-docs | |
| make install-ingest | |
| ./test_unstructured_ingest/test-ingest-src.sh | |
| test_unstructured_api_unit: | |
| strategy: | |
| matrix: | |
| # NOTE(yuming): Unstructured API only use Python 3.10 | |
| python-version: ["3.10"] | |
| runs-on: ubuntu-latest | |
| needs: [setup, lint] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup virtual environment | |
| uses: ./.github/actions/base-cache | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Set up flag for running Unstructured API unit tests | |
| run: | | |
| # NOTE: Change env `SKIP_API_UNIT_FOR_BREAKING_CHANGE` to true if there is a breaking change in Unstructured repo that will break unstructured api unit tests | |
| # TODO: Change env back to false once API unit tests is in sync with unstructured repo | |
| echo "SKIP_API_UNIT_FOR_BREAKING_CHANGE=true" >> $GITHUB_ENV | |
| - name: Set up Python ${{ matrix.python-version }} | |
| if: env.SKIP_API_UNIT_FOR_BREAKING_CHANGE == 'false' | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Setup virtual environment (no cache hit) | |
| if: steps.virtualenv-cache.outputs.cache-hit != 'true' && env.SKIP_API_UNIT_FOR_BREAKING_CHANGE == 'false' | |
| run: | | |
| python${{ matrix.python-version}} -m venv .venv | |
| source .venv/bin/activate | |
| mkdir "$NLTK_DATA" | |
| make install-ci | |
| - name: Test Unstructured API Unit | |
| if: env.SKIP_API_UNIT_FOR_BREAKING_CHANGE == 'false' | |
| run: | | |
| source .venv/bin/activate | |
| # FIXME (yao): sometimes there is cache but we still miss argilla in the env; so we add make install-ci again | |
| make install-ci | |
| sudo apt-get update && sudo apt-get install --yes poppler-utils libreoffice | |
| sudo add-apt-repository -y ppa:alex-p/tesseract-ocr5 | |
| sudo apt-get update | |
| sudo apt-get install -y tesseract-ocr tesseract-ocr-kor | |
| tesseract --version | |
| make install-nltk-models | |
| make test-unstructured-api-unit | |
| changelog: | |
| runs-on: ubuntu-latest | |
| steps: | |
| # need to checkout otherwise paths-filter will fail on merge-queue trigger | |
| - uses: actions/checkout@v4 | |
| - if: github.ref != 'refs/heads/main' | |
| uses: dorny/paths-filter@v3 | |
| id: changes | |
| with: | |
| filters: | | |
| src: | |
| - 'unstructured/**' | |
| - if: steps.changes.outputs.src == 'true' && github.ref != 'refs/heads/main' | |
| uses: dangoslen/changelog-enforcer@v3 | |
| # TODO - figure out best practice for caching docker images | |
| # (Using the virtualenv to get pytest) | |
| test_dockerfile: | |
| runs-on: ubuntu-latest-m | |
| needs: [ setup, lint ] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Test Dockerfile | |
| run: | | |
| echo "UNS_API_KEY=${{ secrets.UNS_API_KEY }}" > uns_test_env_file | |
| make docker-build | |
| make docker-test CI=true UNSTRUCTURED_INCLUDE_DEBUG_METADATA=true | |
| - name: Scan image | |
| uses: anchore/scan-action@v3 | |
| with: | |
| image: "unstructured:dev" | |
| severity-cutoff: critical | |
| only-fixed: true |