Fix/dynamics level diffusion #857
Workflow file for this run
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| name: CI | |
| # Controls when the action will run. | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the master branch | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| env: | |
| VCPKG_VERSION: "1c5a340f6e10985e2d92af174a68dbd15c1fa4e1" # 29/05/2023 commit at https://github.com/microsoft/vcpkg/pull/29067 | |
| CTEST_PARALLEL_LEVEL: "1" | |
| # A workflow is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| ############################################################################### | |
| Linux-float: | |
| runs-on: ubuntu-22.04 | |
| env: | |
| VCPKG_DEFAULT_TRIPLET: x64-linux | |
| steps: | |
| # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
| - uses: actions/checkout@v3 | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt update | |
| sudo apt install -y \ | |
| apt-utils \ | |
| build-essential \ | |
| curl zip unzip tar `# when starting fresh on a WSL image for bootstrapping vcpkg`\ | |
| pkg-config `# for installing libraries with vcpkg`\ | |
| git \ | |
| cmake \ | |
| ninja-build | |
| - uses: hendrikmuhs/[email protected] | |
| with: | |
| key: ${{ github.job }} | |
| - uses: friendlyanon/setup-vcpkg@v1 # Setup vcpkg into ${{github.workspace}} | |
| with: | |
| committish: ${{ env.VCPKG_VERSION }} | |
| cache-version: ${{env.VCPKG_VERSION}} | |
| - name: Install dependencies | |
| run: | | |
| ${{github.workspace}}/vcpkg/vcpkg install --clean-after-build openblas[dynamic-arch] --allow-unsupported # last argument to remove after regression introduced by microsoft/vcpkg#30192 is addressed | |
| # Simbody depends on (open)blas implementation, which -march=native by default, conflicting with cache restore, hence dynamic-arch feature | |
| # Above problem might also be resolved by adding the hash of architecture in the cache key, esp. if more package do the same | |
| ${{github.workspace}}/vcpkg/vcpkg install --clean-after-build \ | |
| eigen3 \ | |
| tbb \ | |
| boost-program-options \ | |
| boost-geometry \ | |
| simbody \ | |
| gtest \ | |
| xsimd \ | |
| pybind11 | |
| - name: Generate buildsystem using float (No test) | |
| run: | | |
| cmake -G Ninja \ | |
| -D CMAKE_BUILD_TYPE=Release \ | |
| -D SPHINXSYS_USE_FLOAT=ON \ | |
| -D CMAKE_TOOLCHAIN_FILE="${{github.workspace}}/vcpkg/scripts/buildsystems/vcpkg.cmake" \ | |
| -D CMAKE_C_COMPILER_LAUNCHER=ccache -D CMAKE_CXX_COMPILER_LAUNCHER=ccache \ | |
| -D SPHINXSYS_CI=ON \ | |
| -S ${{github.workspace}} \ | |
| -B ${{github.workspace}}/build | |
| - name: Build using float | |
| run: cmake --build build --config Release --verbose | |
| ############################################################################### | |
| Linux-double: | |
| runs-on: ubuntu-22.04 | |
| env: | |
| VCPKG_DEFAULT_TRIPLET: x64-linux | |
| steps: | |
| # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
| - uses: actions/checkout@v3 | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt update | |
| sudo apt install -y \ | |
| apt-utils \ | |
| build-essential \ | |
| curl zip unzip tar `# when starting fresh on a WSL image for bootstrapping vcpkg`\ | |
| pkg-config `# for installing libraries with vcpkg`\ | |
| git \ | |
| cmake \ | |
| ninja-build | |
| - uses: hendrikmuhs/[email protected] | |
| with: | |
| key: ${{ github.job }} | |
| - uses: friendlyanon/setup-vcpkg@v1 # Setup vcpkg into ${{github.workspace}} | |
| with: | |
| committish: ${{ env.VCPKG_VERSION }} | |
| cache-version: ${{env.VCPKG_VERSION}} | |
| - name: Install dependencies | |
| run: | | |
| ${{github.workspace}}/vcpkg/vcpkg install --clean-after-build openblas[dynamic-arch] --allow-unsupported # last argument to remove after regression introduced by microsoft/vcpkg#30192 is addressed | |
| # Simbody depends on (open)blas implementation, which -march=native by default, conflicting with cache restore, hence dynamic-arch feature | |
| # Above problem might also be resolved by adding the hash of architecture in the cache key, esp. if more package do the same | |
| ${{github.workspace}}/vcpkg/vcpkg install --clean-after-build \ | |
| eigen3 \ | |
| tbb \ | |
| boost-program-options \ | |
| boost-geometry \ | |
| simbody \ | |
| gtest \ | |
| xsimd \ | |
| pybind11 | |
| - name: Generate buildsystem using double | |
| run: | | |
| cmake -G Ninja \ | |
| -D CMAKE_BUILD_TYPE=Release \ | |
| -D SPHINXSYS_USE_FLOAT=OFF \ | |
| -D CMAKE_TOOLCHAIN_FILE="${{github.workspace}}/vcpkg/scripts/buildsystems/vcpkg.cmake" \ | |
| -D CMAKE_C_COMPILER_LAUNCHER=ccache -D CMAKE_CXX_COMPILER_LAUNCHER=ccache \ | |
| -D SPHINXSYS_CI=ON \ | |
| -S ${{github.workspace}} \ | |
| -B ${{github.workspace}}/build | |
| - name: Build using double | |
| run: cmake --build build --config Release --verbose | |
| - name: Test with the first try | |
| id: first-try | |
| run: | | |
| cd build | |
| ctest --output-on-failure | |
| continue-on-error: true | |
| - name: Test with the second try for failed cases | |
| id: second-try | |
| if: ${{ steps.first-try.outcome == 'failure' }} | |
| run: | | |
| cd build | |
| ctest --rerun-failed --output-on-failure | |
| continue-on-error: true | |
| - name: Test with the third try for failed cases | |
| id: third-try | |
| if: ${{ steps.second-try.outcome == 'failure' }} | |
| run: | | |
| cd build | |
| ctest --rerun-failed --output-on-failure | |
| continue-on-error: true | |
| - name: Test with the fourth try for failed cases | |
| id: fourth-try | |
| if: ${{ steps.third-try.outcome == 'failure' }} | |
| run: | | |
| cd build | |
| ctest --rerun-failed --output-on-failure | |
| continue-on-error: true | |
| - name: Test with the last try for failed cases | |
| if: ${{ steps.fourth-try.outcome == 'failure' }} | |
| run: | | |
| cd build | |
| ctest --rerun-failed --output-on-failure | |
| ############################################################################### | |
| Windows: | |
| runs-on: windows-latest | |
| env: | |
| VCPKG_DEFAULT_TRIPLET: x64-windows | |
| steps: | |
| - uses: actions/checkout@v3 # Checks-out the repository under ${{github.workspace}} | |
| - name: Update ccache and ninja # For correct caching with ccache on Windows | |
| shell: bash | |
| run: | | |
| choco install ccache | |
| choco install ninja | |
| - uses: hendrikmuhs/[email protected] | |
| with: | |
| key: ${{ github.job }} | |
| - uses: friendlyanon/setup-vcpkg@v1 # Setup vcpkg into ${{github.workspace}} | |
| with: | |
| committish: ${{ env.VCPKG_VERSION }} | |
| cache-version: ${{env.VCPKG_VERSION}} | |
| - name: Install dependencies | |
| run: | | |
| ${{github.workspace}}\vcpkg\vcpkg.exe install --clean-after-build ` | |
| eigen3 ` | |
| tbb ` | |
| boost-program-options ` | |
| boost-geometry ` | |
| simbody ` | |
| gtest ` | |
| xsimd ` | |
| pybind11 | |
| - uses: ilammy/msvc-dev-cmd@v1 | |
| - name: Generate buildsystem | |
| run: | | |
| cmake.exe -G Ninja ` | |
| -D CMAKE_BUILD_TYPE=Release ` | |
| -D CMAKE_TOOLCHAIN_FILE="${{github.workspace}}\vcpkg\scripts\buildsystems\vcpkg.cmake" ` | |
| -D CMAKE_C_COMPILER_LAUNCHER=ccache -D CMAKE_CXX_COMPILER_LAUNCHER=ccache ` | |
| -D SPHINXSYS_CI=ON ` | |
| -S ${{github.workspace}} ` | |
| -B C:\build | |
| - name: Build | |
| run: cmake.exe --build C:\build --config Release --verbose | |
| - name: Test with the first try | |
| id: first-try | |
| run: | | |
| cd C:\build | |
| ctest.exe --output-on-failure | |
| continue-on-error: true | |
| - name: Test with the second try for failed cases | |
| id: second-try | |
| if: ${{ steps.first-try.outcome == 'failure' }} | |
| run: | | |
| cd C:\build | |
| ctest.exe --rerun-failed --output-on-failure | |
| continue-on-error: true | |
| - name: Test with the third try for failed cases | |
| id: third-try | |
| if: ${{ steps.second-try.outcome == 'failure' }} | |
| run: | | |
| cd C:\build | |
| ctest.exe --rerun-failed --output-on-failure | |
| continue-on-error: true | |
| - name: Test with the fourth try for failed cases | |
| id: fourth-try | |
| if: ${{ steps.third-try.outcome == 'failure' }} | |
| run: | | |
| cd C:\build | |
| ctest.exe --rerun-failed --output-on-failure | |
| continue-on-error: true | |
| - name: Test with the last try for failed cases | |
| if: ${{ steps.fourth-try.outcome == 'failure' }} | |
| run: | | |
| cd C:\build | |
| ctest.exe --rerun-failed --output-on-failure | |
| ############################################################################### | |
| macOS: | |
| runs-on: macos-12 | |
| env: | |
| VCPKG_DEFAULT_TRIPLET: x64-osx | |
| steps: | |
| # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
| - uses: actions/checkout@v3 | |
| - name: Install system dependencies | |
| run: | | |
| brew reinstall gfortran # to force having gfortran on PATH because github runners don't have it, just the versioned aliases, i.e. gfortran-11 | |
| # https://github.com/actions/runner-images/blob/main/images/macos/macos-12-Readme.md | |
| # https://github.com/actions/runner-images/issues/3371#issuecomment-839882565 | |
| # https://github.com/modflowpy/install-gfortran-action and https://github.com/awvwgk/setup-fortran | |
| brew install \ | |
| pkg-config `# for installing libraries with vcpkg`\ | |
| git \ | |
| cmake \ | |
| ninja | |
| - uses: hendrikmuhs/[email protected] | |
| with: | |
| key: ${{ github.job }} | |
| - uses: friendlyanon/setup-vcpkg@v1 # Setup vcpkg into ${{github.workspace}} | |
| with: | |
| committish: ${{ env.VCPKG_VERSION }} | |
| cache-version: ${{env.VCPKG_VERSION}} | |
| - name: Install dependencies | |
| run: | | |
| ${{github.workspace}}/vcpkg/vcpkg install --clean-after-build \ | |
| eigen3 \ | |
| tbb \ | |
| boost-program-options \ | |
| boost-geometry \ | |
| gtest \ | |
| simbody \ | |
| xsimd \ | |
| pybind11 | |
| - name: Generate buildsystem | |
| run: | | |
| cmake -G Ninja \ | |
| -D CMAKE_C_COMPILER=clang -D CMAKE_CXX_COMPILER=clang++ \ | |
| -D CMAKE_BUILD_TYPE=Release \ | |
| -D CMAKE_TOOLCHAIN_FILE="${{github.workspace}}/vcpkg/scripts/buildsystems/vcpkg.cmake" \ | |
| -D CMAKE_C_COMPILER_LAUNCHER=ccache -D CMAKE_CXX_COMPILER_LAUNCHER=ccache \ | |
| -D SPHINXSYS_CI=ON \ | |
| -S ${{github.workspace}} \ | |
| -B ${{github.workspace}}/build | |
| - name: Build | |
| run: cmake --build build --config Release --verbose | |
| - name: Test with the first try | |
| id: first-try | |
| run: | | |
| cd build | |
| ctest --output-on-failure | |
| continue-on-error: true | |
| - name: Test with the second try for failed cases | |
| id: second-try | |
| if: ${{ steps.first-try.outcome == 'failure' }} | |
| run: | | |
| cd build | |
| ctest --rerun-failed --output-on-failure | |
| continue-on-error: true | |
| - name: Test with the third try for failed cases | |
| id: third-try | |
| if: ${{ steps.second-try.outcome == 'failure' }} | |
| run: | | |
| cd build | |
| ctest --rerun-failed --output-on-failure | |
| continue-on-error: true | |
| - name: Test with the fourth try for failed cases | |
| id: fourth-try | |
| if: ${{ steps.third-try.outcome == 'failure' }} | |
| run: | | |
| cd build | |
| ctest --rerun-failed --output-on-failure | |
| continue-on-error: true | |
| - name: Test with the last try for failed cases | |
| if: ${{ steps.fourth-try.outcome == 'failure' }} | |
| run: | | |
| cd build | |
| ctest --rerun-failed --output-on-failure |