- Keyan Zhao1,2, Zhi-xiang Lu1,2, Juw Won Park1,2, Qing Zhou3
and Yi Xing1,2,4
GLiMMPS: robust statistical model for regulatory variation of alternative splicing using RNA-seq data
Genome Biol. 2013 Jul 22;14(7):R74. doi: 10.1186/gb-2013-14-7-r74.
1 Department of Internal Medicine, University of Iowa, IA 52242, USA.
2 Department of Microbiology, Immunology and Molecular Genetics,
University of California, Los Angeles, CA 90095, USA.
3 Department of Statistics, University of California, Los Angeles, CA
90095, USA.
4 Corresponding author:
Yi Xing
Department of Microbiology, Immunology and Molecular Genetics
University of California, Los Angeles
Los Angeles, CA 90095-7278
Phone: 310-825-6806
Fax: 310-206-3663
Email: [email protected]
Source code, turorial and example dataset for GLiMMPS package
- Source code of the GLiMMPS package
- Tutorial on how to use the GLiMMPS package (PDF)
- Example dataset on how to use the GLiMMPS package( file size ~80 MB)
Supplemental dataset for the manuscript
- Genotype, Junction read counts, and P-values of various models from CEU dataset (~230MB)
- Genotype, Junction read counts, and P-values of various models from CEU2 dataset (~230MB)
(updated on March 12, 2013.)