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1. jyyulab/SJARACNe jyyulab/SJARACNe Public

   Scalable Tool for Gene Network Reverse Engineering

   C++ 24 16

2. jyyulab/NetBID jyyulab/NetBID Public

   Data-driven Network-based Bayesian Inference of Drivers

   R 44 9

3. stjude/RNAIndel stjude/RNAIndel Public

   Somatic indel discovery tool for tumor RNA-Seq data.

   Python 22 8

4. stjude/XenoCP stjude/XenoCP Public

   A cloud-based tool for mouse read cleansing in xenograft samples

   Shell 5 2

5. jyyulab/scMINER jyyulab/scMINER Public

   Single-cell Mutual Information-based Network Engineering Ranger

   R 20 5

6. stjude/Episomizer stjude/Episomizer Public

   Constuct Extrachromosomal Circular DNA using Whole Genome Sequencing Data

   Python 7 4