1.3.4

Adds local directory output of barcode/lineage metadata files

1.3.3

Barcoding bug fix for rare case due to many reversions of multiple mutations at the same site.

1.3.2

Bug fixes, adds extension specification to aggregate.

1.3.1

Adds VCF input format to demix and custom lineage metadata option to variants.

1.3

Adds bootstrap CIs, color control for plotting, bug fixes.

1.2.1

Aggregation fix, custom barcode option added to demix

1.2

Minor bug fixes, added helper functions/visualization to CLI

1.1

Merge pull request #12 from joshuailevy/stream-lining

cleaned up user outputs, cleaned up barcoding

1.0

Merge pull request #9 from joshuailevy/unit-test-adding

Unit test adding