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New feature: allow user to collapse R1 and R2 in the same UMI group to separate consensus reads #22

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bug fixed: corrected sam flag after R1/R2 UMI collapsing

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New feature: allow user to collapse R1 and R2 in the same UMI group to separate consensus reads #22

bug fixed: corrected sam flag after R1/R2 UMI collapsing
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