This push request add the ligand/receptor data to the package and uses package data within functions #140
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Firstly, I added a
__init__.py
file in the spateo/tools/database (where the ligand-receptor files are stored)Then I added a MANIFEST.in file, understand the same folder of setup.py, with the following text:
recursive-include spateo/tools/database *
Then the setup.py file included the line of
include_package_data=True,
We use the following code to access the package data:
path = importlib.resources.path("spateo", "data") if path is None else path
Read more here and here, especially the second answer
Code in the
cell_communication.py
are better formated and missing documentation of args are included