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biocorecrg · Dec 3, 2024 · 279200f · 279200f
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diff --git a/MOP1.1/assets/js/database.js b/MOP1.1/assets/js/database.js
diff --git a/MOP1.1/feed.xml b/MOP1.1/feed.xml
@@ -1 +1 @@
-<?xml version="1.0" encoding="utf-8"?><feed xmlns="http://www.w3.org/2005/Atom" ><generator uri="https://jekyllrb.com/" version="4.3.4">Jekyll</generator><link href="https://biocorecrg.github.io/master_of_pores/MOP1.1/feed.xml" rel="self" type="application/atom+xml" /><link href="https://biocorecrg.github.io/master_of_pores/MOP1.1/" rel="alternate" type="text/html" /><updated>2024-12-03T17:40:07+00:00</updated><id>https://biocorecrg.github.io/master_of_pores/MOP1.1/feed.xml</id><title type="html">Master of Pores</title><subtitle>Nextflow pipeline for analysis of Nanopore data from direct RNA sequencing.</subtitle></feed>
+<?xml version="1.0" encoding="utf-8"?><feed xmlns="http://www.w3.org/2005/Atom" ><generator uri="https://jekyllrb.com/" version="4.3.4">Jekyll</generator><link href="https://biocorecrg.github.io/master_of_pores/MOP1.1/feed.xml" rel="self" type="application/atom+xml" /><link href="https://biocorecrg.github.io/master_of_pores/MOP1.1/" rel="alternate" type="text/html" /><updated>2024-12-03T17:45:46+00:00</updated><id>https://biocorecrg.github.io/master_of_pores/MOP1.1/feed.xml</id><title type="html">Master of Pores</title><subtitle>Nextflow pipeline for analysis of Nanopore data from direct RNA sequencing.</subtitle></feed>
diff --git a/MOP1.1/index.html b/MOP1.1/index.html
@@ -46,7 +46,7 @@
 
 <p><br /></p>
 
-<h1><img src="https://raw.githubusercontent.com/biocorecrg/master_of_pores/master/docs/logo_master.jpg" alt="Direct RNA nanopore analysis pipeline" /></h1>
+<h1><img src="https://raw.githubusercontent.com/biocorecrg/master_of_pores/v1.1/docs/logo_master.jpg" alt="Direct RNA nanopore analysis pipeline" /></h1>
 
 <h1 id="nanopore-analysis-pipeline-v15">Nanopore analysis pipeline v1.5</h1>
 <p>Nextflow pipeline for analysis of Nanopore data from direct RNA sequencing. This is a joint project between <a href="https://biocore.crg.eu/">CRG bioinformatics core</a> and <a href="https://www.crg.eu/en/programmes-groups/novoa-lab">Epitranscriptomics and RNA Dynamics research group</a>.</p>

diff --git a/MOP1.1/nanomod.html b/MOP1.1/nanomod.html
@@ -41,7 +41,7 @@ <h1 id="nanomod">NanoMod</h1>
 
 <h2 id="workflow">Workflow</h2>
 
-<p><img src="https://raw.githubusercontent.com/biocorecrg/master_of_pores/master/docs/dag_mod_2.png" width="600" align="middle" /></p>
+<p><img src="https://raw.githubusercontent.com/biocorecrg/master_of_pores/v1.1/docs/dag_mod_2.png" width="600" align="middle" /></p>
 
 <ul>
   <li><strong>index_reference</strong> index the reference file for Epinano</li>

diff --git a/MOP1.1/nanopreprocess.html b/MOP1.1/nanopreprocess.html
@@ -42,7 +42,7 @@ <h1 id="nanopreprocess">NanoPreprocess</h1>
 
 <h2 id="workflow">Workflow</h2>
 
-<p><img src="https://raw.githubusercontent.com/biocorecrg/master_of_pores/master/docs/dag_graph3.png" width="600" align="middle" /></p>
+<p><img src="https://raw.githubusercontent.com/biocorecrg/master_of_pores/v1.1/docs/dag_graph3.png" width="600" align="middle" /></p>
 
 <table>
   <thead>

diff --git a/MOP1.1/nanotail.html b/MOP1.1/nanotail.html
@@ -41,7 +41,7 @@ <h1 id="nanotail">NanoTail</h1>
 
 <h1 id="workflow">Workflow</h1>
 
-<p><img src="https://raw.githubusercontent.com/biocorecrg/master_of_pores/master/docs/dag_nanotail.png" width="600" align="middle" /></p>
+<p><img src="https://raw.githubusercontent.com/biocorecrg/master_of_pores/v1.1/docs/dag_nanotail.png" width="600" align="middle" /></p>
 
 <ol>
   <li><strong>check_reference</strong> It verifies whether the reference is zipped and eventually unzip it</li>
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		@@ -1 +1 @@
		<?xml version="1.0" encoding="utf-8"?><feed xmlns="http://www.w3.org/2005/Atom" ><generator uri="https://jekyllrb.com/" version="4.3.4">Jekyll</generator><link href="https://biocorecrg.github.io/master_of_pores/MOP1.1/feed.xml" rel="self" type="application/atom+xml" /><link href="https://biocorecrg.github.io/master_of_pores/MOP1.1/" rel="alternate" type="text/html" /><updated>2024-12-03T17:40:07+00:00</updated><id>https://biocorecrg.github.io/master_of_pores/MOP1.1/feed.xml</id><title type="html">Master of Pores</title><subtitle>Nextflow pipeline for analysis of Nanopore data from direct RNA sequencing.</subtitle></feed>
		<?xml version="1.0" encoding="utf-8"?><feed xmlns="http://www.w3.org/2005/Atom" ><generator uri="https://jekyllrb.com/" version="4.3.4">Jekyll</generator><link href="https://biocorecrg.github.io/master_of_pores/MOP1.1/feed.xml" rel="self" type="application/atom+xml" /><link href="https://biocorecrg.github.io/master_of_pores/MOP1.1/" rel="alternate" type="text/html" /><updated>2024-12-03T17:45:46+00:00</updated><id>https://biocorecrg.github.io/master_of_pores/MOP1.1/feed.xml</id><title type="html">Master of Pores</title><subtitle>Nextflow pipeline for analysis of Nanopore data from direct RNA sequencing.</subtitle></feed>
-Original file line number
+Diff line change
@@ Expand Up / @@ -42,7 +42,7 @@ <h1 id="nanopreprocess">NanoPreprocess</h1> @@
     <h2 id="workflow">Workflow</h2>
-    <p><img src="https://raw.githubusercontent.com/biocorecrg/master_of_pores/master/docs/dag_graph3.png" width="600" align="middle" /></p>
+    <p><img src="https://raw.githubusercontent.com/biocorecrg/master_of_pores/v1.1/docs/dag_graph3.png" width="600" align="middle" /></p>
     <table>
       <thead>
@@ Expand Down @@