Adding new sources for DGIdb and Intact ingests #28

	name: Auto-standardize catalog on PR

	on:
	pull_request:
	types: [opened, synchronize, reopened]
	paths:
	- 'infores_catalog.yaml'

	permissions:
	contents: write
	pull-requests: write

	jobs:
	standardize:
	# Skip forks
	if: ${{ github.event.pull_request.head.repo.full_name == github.repository }}
	runs-on: ubuntu-latest

	steps:
	- name: Checkout PR branch
	uses: actions/checkout@v4
	with:
	repository: ${{ github.event.pull_request.head.repo.full_name }}
	ref: ${{ github.event.pull_request.head.ref }}
	fetch-depth: 0

	- name: Setup Python
	uses: actions/setup-python@v5
	with:
	python-version: '3.11'

	- name: Install uv
	uses: astral-sh/setup-uv@v4
	with:
	enable-cache: true

	- name: Install dependencies
	run: uv sync --all-extras

	- name: Run standardization
	run: make standardize-data

	- name: Check for changes
	id: git-check
	run: \|
	if git diff --quiet -- infores_catalog.yaml; then
	echo "changed=false" >> "$GITHUB_OUTPUT"
	else
	echo "changed=true" >> "$GITHUB_OUTPUT"
	fi

	- name: Commit and push if changed
	if: steps.git-check.outputs.changed == 'true'
	run: \|
	git config --local user.email "github-actions[bot]@users.noreply.github.com"
	git config --local user.name "github-actions[bot]"
	git add infores_catalog.yaml
	git commit -m "Auto-standardize infores_catalog.yaml"
	git push

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